RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, human

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN4-215	ENST00000491592	PRSS22	Q9GZN4	317 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	DRC3	Q9H069	523 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	MAGT1	Q9H0U3	335 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	GAL3ST2	Q9H3Q3	398 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	EQTN	Q9NQ60	294 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	HIF1AN	Q9NWT6	349 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	GIN1	Q9NXP7	522 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	ARL15	Q9NXU5	204 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	RDH8	Q9NYR8	311 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	ARMCX1	Q9P291	453 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	ONECUT1	Q9UBC0	465 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	ENPP5	Q9UJA9	477 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	GNPTG	Q9UJJ9	305 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	FBXO4	Q9UKT5	387 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	POMP	Q9Y244	141 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	FAM96B	Q9Y3D0	163 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	TIMM22	Q9Y584	194 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	TAF1L	Q8IZX4	1826 aa		4.41	□□□□□ -1.7
RTN4-215	ENST00000491592	hCG_1818297	A0A087WSY0	165 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TRAV26-1	A0A087WT03	109 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592		A0A087WXM4	84 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CXorf65	A6NEN9	183 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ANKRD66	B4E2M5	251 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TRIM49D1	C9J1S8	452 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SLCO1B7	G3V0H7	640 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	GOLGA8R	I6L899	631 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ADAM10	O14672	748 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TLX3	O43711	291 aa	Predicted RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	GLRA3	O75311	464 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	OR4F21	O95013	312 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	H6PD	O95479	791 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	LSM8	O95777	96 aa	Known RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SERPINB2	P05120	415 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	KRT7	P08729	469 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CD63	P08962	238 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	THRA	P10827	490 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SLC2A4	P14672	509 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	HOXB8	P17481	243 aa	Predicted RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	AMD1	P17707	334 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	PSMC3	P17980	439 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	S1PR1	P21453	382 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TUBG1	P23258	451 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CFL1	P23528	166 aa	Known RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	GSTM2	P28161	218 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ACADL	P28330	430 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SSTR1	P30872	391 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CD80	P33681	288 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	BTD	P43251	543 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TUFM	P49411	452 aa	Known RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CEBPG	P53567	150 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	NLRP11	P59045	1033 aa	Known RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	PRPS1	P60891	318 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	MRPS21	P82921	87 aa	Known RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SORD	Q00796	357 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	MYBPC1	Q00872	1141 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	RHAG	Q02094	409 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CNTN2	Q02246	1040 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ID2	Q02363	134 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	EGR4	Q05215	589 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ZNF91	Q05481	1191 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	NAB1	Q13506	487 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SOWAHA	Q2M3V2	549 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ZBED5	Q49AG3	693 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ATP13A5	Q4VNC0	1218 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CTSL3P	Q5NE16	218 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ATF7IP2	Q5U623	682 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	DCAF12L2	Q5VW00	463 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	IL23R	Q5VWK5	629 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ZNF626	Q68DY1	528 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	NIPAL1	Q6NVV3	410 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TEX38	Q6PEX7	206 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SLC26A9	Q7LBE3	791 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SLC16A9	Q7RTY1	509 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	PRSS45	Q7RTY3	260 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	SNX20	Q7Z614	316 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CYP4Z1	Q86W10	505 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TMEM173	Q86WV6	379 aa	Predicted RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	RBM45	Q8IUH3	476 aa	Known RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CCDC36	Q8IYA8	594 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ZNF595	Q8IYB9	648 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ZDHHC23	Q8IYP9	409 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	C1orf87	Q8N0U7	546 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	C17orf78	Q8N4C9	275 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	GATS	Q8NAP1	163 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	FBXO36	Q8NEA4	188 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	DDHD1	Q8NEL9	900 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	GPRC5A	Q8NFJ5	357 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TTL	Q8NG68	377 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	PHOSPHO2	Q8TCD6	241 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ADAMTS16	Q8TE57	1224 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	GRHL3	Q8TE85	626 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	GIPC3	Q8TF64	312 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	WIPF2	Q8TF74	440 aa	Predicted RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CHPT1	Q8WUD6	406 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	ING5	Q8WYH8	240 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	TOP1MT	Q969P6	601 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	MRGPRF	Q96AM1	343 aa		4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	PINX1	Q96BK5	328 aa	Known RBP	4.4	□□□□□ -1.71
RTN4-215	ENST00000491592	CCDC124	Q96CT7	223 aa	Known RBP	4.4	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms