RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GDF2Q9UK05 429 aaPredicted RBP12.46□□□□□ -0.41
VARS-227ENST00000489979 ZNF225Q9UK10 706 aa12.46□□□□□ -0.41
VARS-227ENST00000489979 VDAC3Q9Y277 283 aa12.46□□□□□ -0.41
VARS-227ENST00000489979 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■■■■■ 41.6
VARS-227ENST00000489979 IGLV3-32A0A0A0MS00 114 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 GNG14A0A1W2PPG7 69 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 CXCL13O43927 109 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 GPRIN2O60269 458 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 SYNGR4O95473 234 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 IL33O95760 270 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 ANGPTL1O95841 491 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 FAM157CP0CG43 387 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 CHN1P15882 459 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 AGTR1P30556 359 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 MPIP34949 423 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 GUCY2DQ02846 1103 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 C17orf67Q0P5P2 114 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 HEPACAMQ14CZ8 416 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 PGGHGQ32M88 737 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 ZNF672Q499Z4 452 aaPredicted RBP12.45□□□□□ -0.42
VARS-227ENST00000489979 MFSD12Q6NUT3 480 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 APOOLQ6UXV4 268 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 ATG4DQ86TL0 474 aaPredicted RBP12.45□□□□□ -0.42
VARS-227ENST00000489979 WDR75Q8IWA0 830 aaKnown RBP12.45□□□□□ -0.42
VARS-227ENST00000489979 ZNF619Q8N2I2 560 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 KBTBD8Q8NFY9 601 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 FBXO25Q8TCJ0 367 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 ZNF483Q8TF39 744 aaPredicted RBP12.45□□□□□ -0.42
VARS-227ENST00000489979 C16orf78Q8WTQ4 265 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 HS6ST2Q96MM7 605 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 BBS4Q96RK4 519 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 NAPGQ99747 312 aaPredicted RBP12.45□□□□□ -0.42
VARS-227ENST00000489979 TBL1XR1Q9BZK7 514 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 ESRP2Q9H6T0 727 aaKnown RBP12.45□□□□□ -0.42
VARS-227ENST00000489979 PAQR5Q9NXK6 330 aaPredicted RBP12.45□□□□□ -0.42
VARS-227ENST00000489979 RNF14Q9UBS8 474 aa12.45□□□□□ -0.42
VARS-227ENST00000489979 YLPM1P49750 1951 aaKnown RBP12.45□□□□□ -0.42
VARS-227ENST00000489979 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 MANBAO00462 879 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 TNFSF11O14788 317 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 GCM2O75603 506 aaPredicted RBP12.44□□□□□ -0.42
VARS-227ENST00000489979 OR4F21O95013 312 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 UTS2O95399 124 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 TUBBP07437 444 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 ZNF17P17021 662 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 GNG11P61952 73 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 TAB1Q15750 504 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 PRSS53Q2L4Q9 553 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 KRTAP24-1Q3LI83 254 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 C6orf52Q5T4I8 152 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 TMEM107Q6UX40 140 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 CEP112Q8N8E3 955 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 CDYL2Q8N8U2 506 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 OR2V1Q8NHB1 315 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 C11orf24Q96F05 449 aaPredicted RBP12.44□□□□□ -0.42
VARS-227ENST00000489979 APIPQ96GX9 242 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 NPAS1Q99742 590 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 TRAF4Q9BUZ4 470 aaPredicted RBP12.44□□□□□ -0.42
VARS-227ENST00000489979 HDHD5Q9BXW7 423 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 Q9N2J8 555 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 NGBQ9NPG2 151 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 FBXO34Q9NWN3 711 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 DMGDHQ9UI17 866 aaKnown RBP12.44□□□□□ -0.42
VARS-227ENST00000489979 MRTO4Q9UKD2 239 aaKnown RBP12.44□□□□□ -0.42
VARS-227ENST00000489979 CDC42EP3Q9UKI2 254 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 C19orf53Q9UNZ5 99 aaPredicted RBP12.44□□□□□ -0.42
VARS-227ENST00000489979 SNX8Q9Y5X2 465 aa12.44□□□□□ -0.42
VARS-227ENST00000489979 IGHV4-30-2A0A087WSY4 118 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 A0A087WV62 115 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 A0A0J9YW62 118 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 ADAMDEC1O15204 470 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 NTN1O95631 604 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 CD8AP01732 235 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 JUNP05412 331 aaKnown RBP12.43□□□□□ -0.42
VARS-227ENST00000489979 HSD3B1P14060 373 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 IL32P24001 234 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 HSD3B2P26439 372 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 NCBP2P52298 156 aaKnown RBP eCLIP12.43□□□□□ -0.42
VARS-227ENST00000489979 PSMD4P55036 377 aaKnown RBP12.43□□□□□ -0.42
VARS-227ENST00000489979 PRR5P85299 388 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 CAV1Q03135 178 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 BSPH1Q075Z2 132 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 TRADDQ15628 312 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 GRAMD1BQ3KR37 738 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 ZDHHC24Q6UX98 284 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 DNAJC14Q6Y2X3 702 aaPredicted RBP12.43□□□□□ -0.42
VARS-227ENST00000489979 ESPNLQ6ZVH7 1005 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 GABRG1Q8N1C3 465 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 GTPBP8Q8N3Z3 284 aaPredicted RBP12.43□□□□□ -0.42
VARS-227ENST00000489979 ROBO4Q8WZ75 1007 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 SLC9A6Q92581 669 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 RHNO1Q9BSD3 238 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 EBPLQ9BY08 206 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 TRIM2Q9C040 744 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 ALG2Q9H553 416 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 TMEM185BQ9H7F4 350 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 LRTM1Q9HBL6 345 aa12.43□□□□□ -0.42
VARS-227ENST00000489979 BARX1Q9HBU1 254 aaPredicted RBP12.43□□□□□ -0.42
VARS-227ENST00000489979 A0A087WZY1 265 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms