RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 TIGD2Q4W5G0 525 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 WIPI1Q5MNZ9 446 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-207ENST00000488591 DCST2Q5T1A1 773 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 ATAD3BQ5T9A4 648 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 SAXO2Q658L1 398 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 C16orf62Q7Z3J2 963 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 ZNF527Q8NB42 609 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 FAM83FQ8NEG4 500 aaPredicted RBP13.72□□□□□ -0.21
CXCL12-207ENST00000488591 OR5D16Q8NGK9 328 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 OR9I1Q8NGQ6 314 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 OR4C3Q8NH37 302 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 MIPOL1Q8TD10 442 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 DUSP19Q8WTR2 217 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 VKORC1Q9BQB6 163 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 INPP5KQ9BT40 448 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 OR51I1Q9H343 314 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 TMEM45AQ9NWC5 275 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 DKKL1Q9UK85 242 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 KCNE3Q9Y6H6 103 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 ZNF407Q9C0G0 2248 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 NCKAP5O14513 1909 aa13.72□□□□□ -0.21
CXCL12-207ENST00000488591 FIGNL2A6NMB9 653 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 ALG1L2C9J202 215 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 KRT75O95678 551 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 OXSR1O95747 527 aaPredicted RBP13.71□□□□□ -0.21
CXCL12-207ENST00000488591 GSNP06396 782 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 SRD5A2P31213 254 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 KHKP50053 298 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 SMSP52788 366 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 DSCR4P56555 118 aaPredicted RBP13.71□□□□□ -0.21
CXCL12-207ENST00000488591 SQLEQ14534 574 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 EIPR1Q53HC9 387 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 C6orf10Q5SRN2 563 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 TMEM211Q6ICI0 200 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 ZNF585AQ6P3V2 769 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 RPTNQ6XPR3 784 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 YRDCQ86U90 279 aaKnown RBP13.71□□□□□ -0.21
CXCL12-207ENST00000488591 MISPQ8IVT2 679 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 OR5M9Q8NGP3 310 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 RFWD2Q8NHY2 731 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 XAGE5Q8WWM1 108 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 OR2B2Q9GZK3 357 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 DSN1Q9H410 356 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 PNPLA3Q9NST1 481 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 FBXO34Q9NWN3 711 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 TAS2R10Q9NYW0 307 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 CCDC167Q9P0B6 97 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 SPRR3Q9UBC9 169 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 FBXL2Q9UKC9 423 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 MRPS18CQ9Y3D5 142 aaKnown RBP13.71□□□□□ -0.21
CXCL12-207ENST00000488591 LRRK2Q5S007 2527 aa13.71□□□□□ -0.21
CXCL12-207ENST00000488591 RELNP78509 3460 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 DNAJC13O75165 2243 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 USP9XQ93008 2570 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 A0A1W2PQD3 144 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 H3BNH8 94 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 ZG16O60844 167 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 WDR1O75083 606 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 STX11O75558 287 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 ACTL6AO96019 429 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 HOXD4P09016 255 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 ZCCHC18P0CG32 403 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 OR12D1P0DN82 309 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 GABRA1P14867 456 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 DPP4P27487 766 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 MDH1P40925 334 aaKnown RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 CDKN2CP42773 168 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 ZFP36L2P47974 494 aaKnown RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 CASP9P55211 416 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 GANABQ14697 944 aaKnown RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 SF3B4Q15427 424 aaKnown RBP eCLIP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 ARHGAP11BQ3KRB8 267 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 FLYWCH1Q4VC44 716 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 AGKQ53H12 422 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 NHSL2Q5HYW2 709 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 METTL21CQ5VZV1 264 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 TNFAIP8L2Q6P589 184 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 AAGABQ6PD74 315 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 BLOC1S3Q6QNY0 202 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 C3P1Q6ZMU1 363 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 IFNEQ86WN2 208 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 PM20D2Q8IYS1 436 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 FADS6Q8N9I5 356 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 CHDHQ8NE62 594 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 OR2M3Q8NG83 312 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 PHF10Q8WUB8 498 aaKnown RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 ABTB1Q969K4 478 aaPredicted RBP13.7□□□□□ -0.22
CXCL12-207ENST00000488591 VPS33AQ96AX1 596 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 CCDC120Q96HB5 630 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 SDF2Q99470 211 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 SERHL2Q9H4I8 314 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 CCDC134Q9H6E4 229 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 FGFR1OP2Q9NVK5 253 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 ALKBH4Q9NXW9 302 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 MED11Q9P086 117 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 TNFRSF10DQ9UBN6 386 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 SLC6A5Q9Y345 797 aa13.7□□□□□ -0.22
CXCL12-207ENST00000488591 FREM3P0C091 2139 aa13.69□□□□□ -0.22
CXCL12-207ENST00000488591 MYO7BQ6PIF6 2116 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms