RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	DSCAM	O60469	2012 aa		13.62	□□□□□ -0.23
NELFA-215	ENST00000488452	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	UQCRHL	A0A096LP55	91 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	TTC36	A6NLP5	189 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	UTS2	O95399	124 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	ANGPTL1	O95841	491 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	IL11	P20809	199 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	NTS	P30990	170 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	GABRA3	P34903	492 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	RFX3	P48380	749 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	PRR5	P85299	388 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	APOOL	Q6UXV4	268 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	GGN	Q86UU5	652 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	OR6K3	Q8NGY3	331 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	TMEM171	Q8WVE6	324 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	IGFBPL1	Q8WX77	278 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	AMDHD1	Q96NU7	426 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	FANCF	Q9NPI8	374 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	PCNX3	Q9H6A9	2034 aa		13.61	□□□□□ -0.23
NELFA-215	ENST00000488452	EXOC1L	A0A1B0GW35	172 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	SHISA8	B8ZZ34	492 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	INAFM1	C9JVW0	142 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	EIF1AY	O14602	144 aa	Known RBP	13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	GMFG	O60234	142 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	TMCC2	O75069	709 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	KCNH1	O95259	989 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	PLG	P00747	810 aa	Predicted RBP	13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	EIF1AX	P47813	144 aa	Known RBP	13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	SLC6A8	P48029	635 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	CTBP2	P56545	445 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	PPP4R4	Q6NUP7	873 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	STAC2	Q6ZMT1	411 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	WDR75	Q8IWA0	830 aa	Known RBP	13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	MMGT1	Q8N4V1	131 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	FAM76A	Q8TAV0	307 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	HHATL	Q9HCP6	504 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	MYNN	Q9NPC7	610 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	ZNF701	Q9NV72	531 aa	Predicted RBP	13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	CLEC4A	Q9UMR7	237 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	VDAC3	Q9Y277	283 aa		13.6	□□□□□ -0.23
NELFA-215	ENST00000488452	HEATR5A	Q86XA9	2040 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452		A0A087WZY1	265 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	GXYLT2	A0PJZ3	443 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	SS18L1	O75177	396 aa	Predicted RBP	13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	IGKV1D-16	P01601	117 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	IFI6	P09912	130 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	ZNF17	P17021	662 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	GCA	P28676	217 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	ECHS1	P30084	290 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	NR1H2	P55055	460 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	FOXA1	P55317	472 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	IMPG1	Q17R60	797 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	GRAMD1B	Q3KR37	738 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	LRRN4CL	Q8ND94	238 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	OR10D3	Q8NH80	312 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	GSTO2	Q9H4Y5	243 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	CXorf56	Q9H5V9	222 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	MID1IP1	Q9NPA3	183 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	GLRX2	Q9NS18	164 aa		13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	MCTS1	Q9ULC4	181 aa	Known RBP	13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	POLR3H	Q9Y535	204 aa	Predicted RBP	13.59	□□□□□ -0.23
NELFA-215	ENST00000488452	UBFD1	O14562	309 aa	Known RBP	13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	SYNGR4	O95473	234 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	PLAU	P00749	431 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	PRPS2	P11908	318 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	WHAMMP3	Q1A5X7	153 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	CPTP	Q5TA50	214 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	BEND4	Q6ZU67	534 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	IKBIP	Q70UQ0	350 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	TRIM46	Q7Z4K8	759 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	EXOC3L1	Q86VI1	746 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	WFDC8	Q8IUA0	241 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	CCNYL1	Q8N7R7	359 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	ZNF611	Q8N823	705 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	GPR151	Q8TDV0	419 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	PIK3R3	Q92569	461 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	PLPPR2	Q96GM1	343 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	ADGRG7	Q96K78	797 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	TMEM204	Q9BSN7	226 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	ACTR6	Q9GZN1	396 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	GPR52	Q9Y2T5	361 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	JMJD1C	Q15652	2540 aa		13.58	□□□□□ -0.24
NELFA-215	ENST00000488452	HIVEP2	P31629	2446 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	ALG1L2	C9J202	215 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	GOLGA8R	I6L899	631 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	HS3ST1	O14792	307 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	ADAMDEC1	O15204	470 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	NDUFB5	O43674	189 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	CXCL13	O43927	109 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	URI1	O94763	535 aa	Predicted RBP	13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	NKX2-2	O95096	273 aa		13.57	□□□□□ -0.24
NELFA-215	ENST00000488452	OPN1LW	P04000	364 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms