RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 OR8G2PQ6IF36 304 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 GALNT17Q6IS24 598 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 HSD11B1LQ7Z5J1 315 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 IFNEQ86WN2 208 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 HSCBQ8IWL3 235 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 MCOLN2Q8IZK6 566 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 HCAR1Q9BXC0 346 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 POLR3FQ9H1D9 316 aaPredicted RBP3.55□□□□□ -1.84
SMC4-218ENST00000486711 TMCC3Q9ULS5 477 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 GMPPBQ9Y5P6 360 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 SPACA6W5XKT8 324 aa3.55□□□□□ -1.84
SMC4-218ENST00000486711 TDRD15B5MCY1 1934 aaKnown RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 ZNF840PA6NDX5 716 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 CCT8L1PA6NM43 557 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 GMFGO60234 142 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 TBX19O60806 448 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 ZNF253O75346 499 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 GJB5O95377 273 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 ALPIP09923 528 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 ATP6V1C1P21283 382 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 HNRNPA2B1P22626 353 aaKnown RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 ATP5A1P25705 553 aaKnown RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 MAGEA9P43362 315 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 IFNAR2P48551 515 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 ACADVLP49748 655 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 RGS1Q08116 209 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 SNTB2Q13425 540 aaKnown RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 MAPK6Q16659 721 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 CYP51A1Q16850 503 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 NADK2Q4G0N4 442 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 LINC01620Q4KN68 170 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 EIPR1Q53HC9 387 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 LANCL3Q6ZV70 420 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 DPY19L4Q7Z388 723 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 ANKRD37Q7Z713 158 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 TMEM17Q86X19 198 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 UNC5CLQ8IV45 518 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 BPIFB2Q8N4F0 458 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 ZNF540Q8NDQ6 660 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 GMCL1P1Q8NEA9 526 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 RHOXF1Q8NHV9 184 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 MYLPFQ96A32 169 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 TRIM44Q96DX7 344 aaPredicted RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 C4orf36Q96KX1 117 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 UTP6Q9NYH9 597 aaKnown RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 MRPL39Q9NYK5 338 aaKnown RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 CYTH4Q9UIA0 394 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 DUSP12Q9UNI6 340 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 CSAG2Q9Y5P2 127 aa3.54□□□□□ -1.84
SMC4-218ENST00000486711 DDX49Q9Y6V7 483 aaKnown RBP3.54□□□□□ -1.84
SMC4-218ENST00000486711 USP6P35125 1406 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 KIF16BQ96L93 1317 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 ZNF318Q5VUA4 2279 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 SAP18O00422 153 aaKnown RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 CT45A10P0DMU9 189 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 IDSP22304 550 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 RPL4P36578 427 aaKnown RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 MAGEA5P43359 124 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 ALDH3B2P48448 385 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 NOVA1P51513 510 aaKnown RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 RUNX3Q13761 415 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 ATXN7L3Q14CW9 347 aaPredicted RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 CHI3L2Q15782 390 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 PDK4Q16654 411 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 C15orf32Q32M92 178 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 TEX44Q53QW1 395 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 CELF3Q5SZQ8 465 aaKnown RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 GRAMD2AQ8IUY3 354 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 ZDHHC21Q8IVQ6 265 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 PNPT1Q8TCS8 783 aaKnown RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 IL1F10Q8WWZ1 152 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 C18orf25Q96B23 403 aaPredicted RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 PPP1R16AQ96I34 528 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 C1orf147Q96MC9 270 aaPredicted RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 OR5M11Q96RB7 305 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 ELOVL4Q9GZR5 314 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 OPN3Q9H1Y3 402 aaPredicted RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 CALHM2Q9HA72 323 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 MEPEQ9NQ76 525 aaPredicted RBP3.53□□□□□ -1.84
SMC4-218ENST00000486711 EHFQ9NZC4 300 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 RSPH14Q9UHP6 348 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 OR10H1Q9Y4A9 318 aa3.53□□□□□ -1.84
SMC4-218ENST00000486711 A0A087WWV3 80 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 ZSCAN5BA6NJL1 495 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 A8MX80 341 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 PPIAL4DF5H284 164 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 H0YCG3 227 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 CTAGE5O15320 804 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 GPAA1O43292 621 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 HBQ1P09105 142 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 CLUP10909 449 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 LAMP1P11279 417 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 PRG2P13727 222 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 PGAM2P15259 253 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 RPA2P15927 270 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 DRD5P21918 477 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 CDH5P33151 784 aaPredicted RBP3.52□□□□□ -1.85
SMC4-218ENST00000486711 CHI3L1P36222 383 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms