RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 VPS29Q9UBQ0 182 aa17.15■□□□□ 0.34
CHRD-216ENST00000486066 MYO1GB0I1T2 1018 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 HSD3B1P14060 373 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 CHN1P15882 459 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 HSD3B2P26439 372 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 ARL1P40616 181 aaPredicted RBP17.14■□□□□ 0.33
CHRD-216ENST00000486066 MAGEA4P43358 317 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 CALCOCO2Q13137 446 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 TMEM249Q2WGJ8 235 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 TCHHL1Q5QJ38 904 aaPredicted RBP17.14■□□□□ 0.33
CHRD-216ENST00000486066 KLC3Q6P597 504 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 GALNT18Q6P9A2 607 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 FIGNL1Q6PIW4 674 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 TMEM151AQ8N4L1 468 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 PIWIL2Q8TC59 973 aaKnown RBP17.14■□□□□ 0.33
CHRD-216ENST00000486066 HOXB13Q92826 284 aaPredicted RBP17.14■□□□□ 0.33
CHRD-216ENST00000486066 GTPBP3Q969Y2 492 aaKnown RBP17.14■□□□□ 0.33
CHRD-216ENST00000486066 HDHD5Q9BXW7 423 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 SHCBP1LQ9BZQ2 653 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 ESRP2Q9H6T0 727 aaKnown RBP17.14■□□□□ 0.33
CHRD-216ENST00000486066 TMCO1Q9UM00 188 aa17.14■□□□□ 0.33
CHRD-216ENST00000486066 C19orf53Q9UNZ5 99 aaPredicted RBP17.14■□□□□ 0.33
CHRD-216ENST00000486066 A0A0J9YW62 118 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 DPRXA6NFQ7 191 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 FAM187AA6NFU0 413 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 ELOA3DA6NLF2 546 aaPredicted RBP17.13■□□□□ 0.33
CHRD-216ENST00000486066 CLOCKO15516 846 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 CXCL13O43927 109 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 ANGPTL1O95841 491 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 PLGP00747 810 aaPredicted RBP17.13■□□□□ 0.33
CHRD-216ENST00000486066 IGKV1D-16P01601 117 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 TUBBP07437 444 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 CD3EP07766 207 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 SBK3P0C264 359 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 VLDLRP98155 873 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 C17orf67Q0P5P2 114 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 ZNF155Q12901 538 aaPredicted RBP17.13■□□□□ 0.33
CHRD-216ENST00000486066 TSC22D1Q15714 1073 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 ELOA3BQ3SY89 546 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 SFRP5Q5T4F7 317 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 LGSNQ5TDP6 509 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 ZDHHC24Q6UX98 284 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 STK32CQ86UX6 486 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 FAM9CQ8IZT9 166 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 OR2L13Q8N349 312 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 ELOA3Q8NG57 546 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 RNF128Q8TEB7 428 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 TACO1Q9BSH4 297 aaKnown RBP17.13■□□□□ 0.33
CHRD-216ENST00000486066 LMF2Q9BU23 707 aaKnown RBP17.13■□□□□ 0.33
CHRD-216ENST00000486066 PRRG4Q9BZD6 226 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 BARX1Q9HBU1 254 aaPredicted RBP17.13■□□□□ 0.33
CHRD-216ENST00000486066 XPR1Q9UBH6 696 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 MCTS1Q9ULC4 181 aaKnown RBP17.13■□□□□ 0.33
CHRD-216ENST00000486066 SNX6Q9UNH7 406 aa17.13■□□□□ 0.33
CHRD-216ENST00000486066 MEGF8Q7Z7M0 2845 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 GOLGA8QA0A0J9YX86 632 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 A0A1W2PP18 115 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 GOLGA8OA6NCC3 632 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 SHISA9B4DS77 424 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 GOLGA8NF8WBI6 632 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 GOLGA8RI6L899 631 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 UPK1AO00322 258 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 COQ9O75208 318 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 OTCP00480 354 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 MAP3K8P41279 467 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 SERPINB8P50452 374 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 RAC1P63000 192 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 BSPH1Q075Z2 132 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 LOXL1Q08397 574 aaPredicted RBP17.12■□□□□ 0.33
CHRD-216ENST00000486066 DECR1Q16698 335 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 ESPNLQ6ZVH7 1005 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 WDR75Q8IWA0 830 aaKnown RBP17.12■□□□□ 0.33
CHRD-216ENST00000486066 OR2V1Q8NHB1 315 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHRD-216ENST00000486066 POC1BQ8TC44 478 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 FBXO25Q8TCJ0 367 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 C16orf78Q8WTQ4 265 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 HSD17B8Q92506 261 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 TNFRSF13CQ96RJ3 184 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 KLHDC3Q9BQ90 382 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 C12orf49Q9H741 205 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 PFDN4Q9NQP4 134 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 FBXO34Q9NWN3 711 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 NMRK1Q9NWW6 199 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 SIRT5Q9NXA8 310 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 VDAC3Q9Y277 283 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 SAR1BQ9Y6B6 198 aa17.12■□□□□ 0.33
CHRD-216ENST00000486066 A0A087WZY1 265 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 ALG1L2C9J202 215 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 MANBAO00462 879 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 RAD51CO43502 376 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 PCDH7O60245 1069 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 SLITRK5O94991 958 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 UTS2O95399 124 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 RBP1P09455 135 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 TYK2P29597 1187 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 MPIP34949 423 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 CDH13P55290 713 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 FAPQ12884 760 aa17.11■□□□□ 0.33
CHRD-216ENST00000486066 CSTF3Q12996 717 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms