RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 FAM86B1Q8N7N1 296 aa10□□□□□ -0.81
DDX56-212ENST00000485367 CLEC18CQ8NCF0 446 aa10□□□□□ -0.81
DDX56-212ENST00000485367 ZNF740Q8NDX6 193 aa10□□□□□ -0.81
DDX56-212ENST00000485367 IL17RDQ8NFM7 739 aa10□□□□□ -0.81
DDX56-212ENST00000485367 OR4K1Q8NGD4 311 aa10□□□□□ -0.81
DDX56-212ENST00000485367 OR51Q1Q8NH59 317 aa10□□□□□ -0.81
DDX56-212ENST00000485367 SLC5A11Q8WWX8 675 aa10□□□□□ -0.81
DDX56-212ENST00000485367 METTL21AQ8WXB1 218 aa10□□□□□ -0.81
DDX56-212ENST00000485367 NEIL2Q969S2 332 aa10□□□□□ -0.81
DDX56-212ENST00000485367 PITX2Q99697 317 aa10□□□□□ -0.81
DDX56-212ENST00000485367 EGFL8Q99944 293 aa10□□□□□ -0.81
DDX56-212ENST00000485367 AIFM2Q9BRQ8 373 aa10□□□□□ -0.81
DDX56-212ENST00000485367 ALOXE3Q9BYJ1 711 aa10□□□□□ -0.81
DDX56-212ENST00000485367 SLC29A3Q9BZD2 475 aa10□□□□□ -0.81
DDX56-212ENST00000485367 ASF1BQ9NVP2 202 aa10□□□□□ -0.81
DDX56-212ENST00000485367 NDRG4Q9ULP0 352 aaKnown RBP10□□□□□ -0.81
DDX56-212ENST00000485367 CSAG2Q9Y5P2 127 aa10□□□□□ -0.81
DDX56-212ENST00000485367 GMPPBQ9Y5P6 360 aa10□□□□□ -0.81
DDX56-212ENST00000485367 IGHV1-45A0A0A0MS14 117 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 TRBC2A0A5B9 178 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 ZNF860A6NHJ4 632 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 FAM25AB3EWG3 89 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 FAM25CB3EWG5 89 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 FAM25GB3EWG6 89 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 AIREO43918 545 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 FAM20BO75063 409 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 RDH16O75452 317 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 KLHL18O94889 574 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 SERPINA7P05543 415 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 C8orf89P0DMQ9 161 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 PRKCAP17252 672 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 IFNA8P32881 189 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 SOX11P35716 441 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 DDOSTP39656 456 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 XCR1P46094 333 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 TEKQ02763 1124 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 MFAP5Q13361 173 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 MAD2L1BPQ15013 274 aaPredicted RBP9.99□□□□□ -0.81
DDX56-212ENST00000485367 CDK10Q15131 360 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 TSNQ15631 228 aaKnown RBP9.99□□□□□ -0.81
DDX56-212ENST00000485367 RUNDC3AQ59EK9 446 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 Q6ZSR9 355 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 ADAMTSL2Q86TH1 951 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 CLIP4Q8N3C7 705 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 OR6F1Q8NGZ6 308 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 GTF2H4Q92759 462 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 PYURFQ96I23 114 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 THUMPD3Q9BV44 507 aaKnown RBP9.99□□□□□ -0.81
DDX56-212ENST00000485367 VN1R1Q9GZP7 353 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 SLA2Q9H6Q3 261 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 ASIC5Q9NY37 505 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 VAPAQ9P0L0 249 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 PTGFRNQ9P2B2 879 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 ZNF225Q9UK10 706 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 SAMD4AQ9UPU9 718 aaKnown RBP9.99□□□□□ -0.81
DDX56-212ENST00000485367 SLC22A14Q9Y267 594 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 TRAPPC4Q9Y296 219 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 WBP11Q9Y2W2 641 aaKnown RBP9.99□□□□□ -0.81
DDX56-212ENST00000485367 OARD1Q9Y530 152 aa9.99□□□□□ -0.81
DDX56-212ENST00000485367 TNPO3Q9Y5L0 923 aaKnown RBP9.99□□□□□ -0.81
DDX56-212ENST00000485367 USP9YO00507 2555 aaPredicted RBP9.99□□□□□ -0.81
DDX56-212ENST00000485367 LOC102723996A0A087X1L8 192 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 A0A1B0GTL3 188 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 OR2W5A6NFC9 320 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 PCDH17O14917 1159 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 SEC22BO75396 215 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 ERN1O75460 977 aaKnown RBP9.98□□□□□ -0.81
DDX56-212ENST00000485367 FADS2O95864 444 aaKnown RBP9.98□□□□□ -0.81
DDX56-212ENST00000485367 CELA2AP08217 269 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 FMO3P31513 532 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 CLK3P49761 638 aaKnown RBP9.98□□□□□ -0.81
DDX56-212ENST00000485367 EFNA3P52797 238 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 RGS1Q08116 209 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 MRPL49Q13405 166 aaKnown RBP9.98□□□□□ -0.81
DDX56-212ENST00000485367 DGCR6Q14129 220 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 PCOLCEQ15113 449 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 MAPKAPK3Q16644 382 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 C18orf21Q32NC0 220 aaPredicted RBP9.98□□□□□ -0.81
DDX56-212ENST00000485367 CCDC58Q4VC31 144 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 CRB2Q5IJ48 1285 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 FHL5Q5TD97 284 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 TMEM205Q6UW68 189 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 IGFL2Q6UWQ7 119 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 TMEM179BQ7Z7N9 219 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 CALHM3Q86XJ0 350 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 UBQLNLQ8IYU4 475 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 HS3ST5Q8IZT8 346 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 PARP16Q8N5Y8 322 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 SIRT6Q8N6T7 355 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 OR10A6Q8NH74 314 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 BRIX1Q8TDN6 353 aaKnown RBP9.98□□□□□ -0.81
DDX56-212ENST00000485367 TMCO6Q96DC7 493 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 LMF1Q96S06 567 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 RBCK1Q9BYM8 510 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 ZNF700Q9H0M5 742 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 SPNS1Q9H2V7 528 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 PLCXD1Q9NUJ7 323 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.98□□□□□ -0.81
DDX56-212ENST00000485367 KCNN3Q9UGI6 736 aa9.98□□□□□ -0.81
DDX56-212ENST00000485367 RNF6Q9Y252 685 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms