RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 FGFR1OP2Q9NVK5 253 aa16.2■□□□□ 0.18
SREBF1-213ENST00000485080 FBXO34Q9NWN3 711 aa16.2■□□□□ 0.18
SREBF1-213ENST00000485080 KCNE3Q9Y6H6 103 aa16.2■□□□□ 0.18
SREBF1-213ENST00000485080 TRGV8A0A0C4DH27 118 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 A0A0G2JND7 137 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 B4DXG7 233 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 KRT75O95678 551 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 OXSR1O95747 527 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-213ENST00000485080 ENDOUP21128 410 aaKnown RBP16.19■□□□□ 0.18
SREBF1-213ENST00000485080 SRD5A2P31213 254 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 CHI3L1P36222 383 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-213ENST00000485080 CDKN2CP42773 168 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 RPS26P62854 115 aaKnown RBP16.19■□□□□ 0.18
SREBF1-213ENST00000485080 C17orf67Q0P5P2 114 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 ARHGAP11BQ3KRB8 267 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 TIGD2Q4W5G0 525 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 C1QL3Q5VWW1 255 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 ZNF621Q6ZSS3 439 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 MISPQ8IVT2 679 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 EID3Q8N140 333 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 CLEC4FQ8N1N0 589 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 OR5D16Q8NGK9 328 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 SSC4DQ8WTU2 575 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 GTF2H4Q92759 462 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 OTUB1Q96FW1 271 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-213ENST00000485080 TBL1XR1Q9BZK7 514 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 RTN4RQ9BZR6 473 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 NMUR2Q9GZQ4 415 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 LDAHQ9H6V9 325 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 EXD2Q9NVH0 621 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 HRH3Q9Y5N1 445 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 GMEB1Q9Y692 573 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 MED12Q93074 2177 aa16.19■□□□□ 0.18
SREBF1-213ENST00000485080 C2orf72A6NCS6 295 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 E9PLN8 166 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 TRAPPC6AO75865 159 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 VIMP08670 466 aaKnown RBP16.18■□□□□ 0.18
SREBF1-213ENST00000485080 ATP6V1C1P21283 382 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 RFX3P48380 749 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 KHKP50053 298 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 ANXA11P50995 505 aaKnown RBP16.18■□□□□ 0.18
SREBF1-213ENST00000485080 GANABQ14697 944 aaKnown RBP16.18■□□□□ 0.18
SREBF1-213ENST00000485080 EMC4Q5J8M3 183 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 CCNJQ5T5M9 372 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 CGB2Q6NT52 195 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 MARCH3Q86UD3 253 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 FAM83FQ8NEG4 500 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-213ENST00000485080 OR2M3Q8NG83 312 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 ZFP90Q8TF47 636 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 DUSP19Q8WTR2 217 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 TSPEARQ8WU66 669 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 PHF10Q8WUB8 498 aaKnown RBP16.18■□□□□ 0.18
SREBF1-213ENST00000485080 VPS33AQ96AX1 596 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 SPDL1Q96EA4 605 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 CHMP6Q96FZ7 201 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 VKORC1Q9BQB6 163 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 ZNF350Q9GZX5 532 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 SLC6A15Q9H2J7 730 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 OR51I1Q9H343 314 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 TP63Q9H3D4 680 aaPredicted RBP16.18■□□□□ 0.18
SREBF1-213ENST00000485080 POLE3Q9NRF9 147 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 PPP4R1LQ9P1A2 415 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 SPRR3Q9UBC9 169 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 TINAGQ9UJW2 476 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 FBXL2Q9UKC9 423 aa16.18■□□□□ 0.18
SREBF1-213ENST00000485080 A0A096LPI6 279 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 SCO2O43819 266 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 STX11O75558 287 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 ANGPTL1O95841 491 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 HOXD4P09016 255 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 HOXB9P17482 250 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 MSX1P28360 303 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 ATP12AP54707 1039 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 DSCR4P56555 118 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 GLYR1Q49A26 553 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 GXYLT1Q4G148 440 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 KLHL26Q53HC5 615 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 ATAD3BQ5T9A4 648 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 VASNQ6EMK4 673 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 MTERF4Q7Z6M4 381 aaKnown RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 FJX1Q86VR8 437 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 ZNF527Q8NB42 609 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 OR4K17Q8NGC6 315 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 THOC1Q96FV9 657 aaKnown RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 DMRTA2Q96SC8 542 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 TMEM120AQ9BXJ8 343 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 SAP130Q9H0E3 1048 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 SLC6A13Q9NSD5 602 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 CCDC167Q9P0B6 97 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 SUCOQ9UBS9 1254 aaKnown RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 LIPT1Q9Y234 373 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 MEMO1Q9Y316 297 aa16.17■□□□□ 0.18
SREBF1-213ENST00000485080 UTP20O75691 2785 aaKnown RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 NCOA6Q14686 2063 aaPredicted RBP16.17■□□□□ 0.18
SREBF1-213ENST00000485080 PCNX3Q9H6A9 2034 aa16.16■□□□□ 0.18
SREBF1-213ENST00000485080 A0A1W2PP18 115 aa16.16■□□□□ 0.18
SREBF1-213ENST00000485080 NPIPA2E9PIF3 369 aa16.16■□□□□ 0.18
SREBF1-213ENST00000485080 NPIPA3F8WFD2 350 aa16.16■□□□□ 0.18
SREBF1-213ENST00000485080 HMGN4O00479 90 aa16.16■□□□□ 0.18
SREBF1-213ENST00000485080 CCL21O00585 134 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms