RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TSSK3Q96PN8 268 aa16.21■□□□□ 0.19
ATG4B-221ENST00000483778 PIGQQ9BRB3 760 aa16.21■□□□□ 0.19
ATG4B-221ENST00000483778 ACBD3Q9H3P7 528 aa16.21■□□□□ 0.19
ATG4B-221ENST00000483778 LRTM1Q9HBL6 345 aa16.21■□□□□ 0.19
ATG4B-221ENST00000483778 Q9N2J8 555 aa16.21■□□□□ 0.19
ATG4B-221ENST00000483778 SDHAF3Q9NRP4 125 aa16.21■□□□□ 0.19
ATG4B-221ENST00000483778 C1orf109Q9NX04 203 aa16.21■□□□□ 0.19
ATG4B-221ENST00000483778 EDARQ9UNE0 448 aa16.21■□□□□ 0.19
ATG4B-221ENST00000483778 WBP11Q9Y2W2 641 aaKnown RBP16.21■□□□□ 0.19
ATG4B-221ENST00000483778 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 TMEM233B4DJY2 109 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 CTIFO43310 598 aaKnown RBP16.2■□□□□ 0.18
ATG4B-221ENST00000483778 ANGPTL1O95841 491 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 CRHP06850 196 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 PRPH2P23942 346 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 CD79BP40259 229 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 PRR5P85299 388 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 PCLAFQ15004 111 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 PON3Q15166 354 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 ANKRD34AQ69YU3 496 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 IKBIPQ70UQ0 350 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 Q71RC1 249 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-221ENST00000483778 ZNF550Q7Z398 422 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 GGNQ86UU5 652 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 MEIOBQ8N635 442 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 CCDC63Q8NA47 563 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 GATSQ8NAP1 163 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 GPR151Q8TDV0 419 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 UBLCP1Q8WVY7 318 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-221ENST00000483778 SLC9A6Q92581 669 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 GIMAP5Q96F15 307 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 FAM111AQ96PZ2 611 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 RNF122Q9H9V4 155 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 GIMAP2Q9UG22 337 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 NDRG3Q9UGV2 375 aa16.2■□□□□ 0.18
ATG4B-221ENST00000483778 IGLV3-32A0A0A0MS00 114 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 SLC28A1O00337 649 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 CASKO14936 926 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 AZIN1O14977 448 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 PDPK1O15530 556 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 SLITRK5O94991 958 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 NKX2-2O95096 273 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 PRPS2P11908 318 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 KRT4P19013 534 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 CCT5P48643 541 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 EEF1A1P68104 462 aaKnown RBP16.19■□□□□ 0.18
ATG4B-221ENST00000483778 SLC18A2Q05940 514 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 C17orf67Q0P5P2 114 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 GUSBP1Q15486 140 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 ZNHIT3Q15649 155 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-221ENST00000483778 UGT3A2Q3SY77 523 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 EEF1A1P5Q5VTE0 462 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 LIPMQ5VYY2 423 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 FIGNL1Q6PIW4 674 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 TDRPQ86YL5 185 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 SLC16A11Q8NCK7 471 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 NUP43Q8NFH3 380 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 FAM110BQ8TC76 370 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 MARK4Q96L34 752 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 TBL1XR1Q9BZK7 514 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 REEP4Q9H6H4 257 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 NTMQ9P121 344 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 VDAC3Q9Y277 283 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 DNAJC15Q9Y5T4 150 aa16.19■□□□□ 0.18
ATG4B-221ENST00000483778 ZANQ9Y493 2812 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 KIF2AO00139 706 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-221ENST00000483778 COPEO14579 308 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 EMC8O43402 210 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 CHRNGP07510 517 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 LOXP28300 417 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-221ENST00000483778 UGT2B10P36537 528 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 FRKP42685 505 aaPredicted RBP16.18■□□□□ 0.18
ATG4B-221ENST00000483778 GANABQ14697 944 aaKnown RBP16.18■□□□□ 0.18
ATG4B-221ENST00000483778 DUSP5Q16690 384 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 KRTAP21-3Q3LHN1 58 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 OR2A2Q6IF42 318 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 OR2W6PQ8NHA6 318 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 HS3ST6Q96QI5 342 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 PTGES2Q9H7Z7 377 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 SH3BP4Q9P0V3 963 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 CLEC4AQ9UMR7 237 aa16.18■□□□□ 0.18
ATG4B-221ENST00000483778 USF3Q68DE3 2245 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 H3BQF6 201 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 LSM1O15116 133 aaKnown RBP16.17■□□□□ 0.18
ATG4B-221ENST00000483778 RGS14O43566 566 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 KCNK2O95069 426 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 GOSR1O95249 250 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 OXSR1O95747 527 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-221ENST00000483778 FOSL1P15407 271 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 ALDH3A1P30838 453 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 ARRB2P32121 409 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 GPC1P35052 558 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 CLK3P49761 638 aaKnown RBP16.17■□□□□ 0.18
ATG4B-221ENST00000483778 MANFP55145 182 aaKnown RBP16.17■□□□□ 0.18
ATG4B-221ENST00000483778 NAA20P61599 178 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 NKX6-1P78426 367 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-221ENST00000483778 PDE7AQ13946 482 aa16.17■□□□□ 0.18
ATG4B-221ENST00000483778 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.17■□□□□ 0.18
ATG4B-221ENST00000483778 GLYR1Q49A26 553 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-221ENST00000483778 EXOSC6Q5RKV6 272 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms