RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PAXXQ9BUH6 204 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 GMPPBQ9Y5P6 360 aa4.21□□□□□ -1.74
SF3B1-210ENST00000482158 DUX1O43812 170 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 KRT6BP04259 564 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 KRTAP5-9P26371 169 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 KRT6CP48668 564 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 NOVA1P51513 510 aaKnown RBP4.2□□□□□ -1.74
SF3B1-210ENST00000482158 LIM2P55344 173 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 RPL8P62917 257 aaKnown RBP4.2□□□□□ -1.74
SF3B1-210ENST00000482158 ASAH1Q13510 395 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 CHI3L2Q15782 390 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 QRICH1Q2TAL8 776 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 TTC31Q49AM3 519 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-210ENST00000482158 MARC1Q5VT66 337 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 MEDAGQ5VYS4 303 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 LANCL3Q6ZV70 420 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 GPD1LQ8N335 351 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 FBXL16Q8N461 479 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 CCDC26Q8TAB7 109 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 NANPQ8TBE9 248 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 C16orf45Q96MC5 204 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-210ENST00000482158 DPH7Q9BTV6 452 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 DEFB126Q9BYW3 111 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 ELOVL4Q9GZR5 314 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 POLR3FQ9H1D9 316 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-210ENST00000482158 DPH5Q9H2P9 285 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 PRR34Q9NV39 138 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 ABCD2Q9UBJ2 740 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 L3MBTL1Q9Y468 752 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 USP16Q9Y5T5 823 aa4.2□□□□□ -1.74
SF3B1-210ENST00000482158 SAGE2PA6NJ88 616 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 FAM74A7A6NL05 159 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 H2AFZP0C0S5 128 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 DLSTP36957 453 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 ZNF154Q13106 437 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 PEX6Q13608 980 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 FAM74A3Q4VXF1 159 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 TMEM41BQ5BJD5 291 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 SLC22A10Q63ZE4 541 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 SULT1C3Q6IMI6 304 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 AFTPHQ6ULP2 937 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 CENPUQ71F23 418 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 ZNF573Q86YE8 665 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 CSNK1A1LQ8N752 337 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 FADS6Q8N9I5 356 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 OR9A4Q8NGU2 314 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 M1APQ8TC57 530 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 OR5M11Q96RB7 305 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 FEM1AQ9BSK4 669 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 WDR76Q9H967 626 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 TNFRSF19Q9NS68 423 aa4.19□□□□□ -1.74
SF3B1-210ENST00000482158 CARMIL1Q5VZK9 1371 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 CROCCQ5TZA2 2017 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 JAK2O60674 1132 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 STX11O75558 287 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 OPN1LWP04000 364 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 BCKDHAP12694 445 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 H2AFXP16104 143 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-210ENST00000482158 NAPAP54920 295 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 SERTAD2Q14140 314 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 GSG1Q2KHT4 349 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 GLYR1Q49A26 553 aaPredicted RBP4.18□□□□□ -1.74
SF3B1-210ENST00000482158 DCST2Q5T1A1 773 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 PVRIGQ6DKI7 326 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 ANKRD37Q7Z713 158 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 IFNEQ86WN2 208 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 SPAG16Q8N0X2 631 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 TMEM80Q96HE8 168 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 C4orf36Q96KX1 117 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 GPA33Q99795 319 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 NFKBIZQ9BYH8 718 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 SLITRK2Q9H156 845 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 COG4Q9H9E3 785 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 SLC35D1Q9NTN3 355 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 RDH8Q9NYR8 311 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 DPM3Q9P2X0 92 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 CYTH4Q9UIA0 394 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 CHMP2BQ9UQN3 213 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 VSIG4Q9Y279 399 aa4.18□□□□□ -1.74
SF3B1-210ENST00000482158 ZNF646O15015 1829 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-210ENST00000482158 IGLV3-10A0A075B6K4 115 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 TRIM3O75382 744 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-210ENST00000482158 B3GAT3O94766 335 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 IGF1P05019 195 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 HEXBP07686 556 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 CALCBP10092 127 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 TNNI3P19429 210 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 ACAA2P42765 397 aaKnown RBP4.17□□□□□ -1.74
SF3B1-210ENST00000482158 RND3P61587 244 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 KCNJ11Q14654 390 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 DNAJC21Q5F1R6 531 aaKnown RBP4.17□□□□□ -1.74
SF3B1-210ENST00000482158 CELF3Q5SZQ8 465 aaKnown RBP4.17□□□□□ -1.74
SF3B1-210ENST00000482158 MCOLN2Q8IZK6 566 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 ZNF525Q8N782 197 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 THUMPD2Q9BTF0 503 aaKnown RBP4.17□□□□□ -1.74
SF3B1-210ENST00000482158 ZNF416Q9BWM5 594 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 TSSK1BQ9BXA7 367 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 DHX33Q9H6R0 707 aaKnown RBP4.17□□□□□ -1.74
SF3B1-210ENST00000482158 POLD4Q9HCU8 107 aa4.17□□□□□ -1.74
SF3B1-210ENST00000482158 PNO1Q9NRX1 252 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms