RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 ROPN1Q9HAT0 212 aaPredicted RBP14.35□□□□□ -0.11
CHRD-213ENST00000482014 LRTM1Q9HBL6 345 aa14.35□□□□□ -0.11
CHRD-213ENST00000482014 SERHLQ9NQF3 203 aa14.35□□□□□ -0.11
CHRD-213ENST00000482014 SLC17A7Q9P2U7 560 aa14.35□□□□□ -0.11
CHRD-213ENST00000482014 DNAJC15Q9Y5T4 150 aa14.35□□□□□ -0.11
CHRD-213ENST00000482014 USF3Q68DE3 2245 aa14.35□□□□□ -0.11
CHRD-213ENST00000482014 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.34□□□□□ -0.111e-9■■■□□ 14.6
CHRD-213ENST00000482014 NPHS1O60500 1241 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 TBX19O60806 448 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 ACTL6AO96019 429 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 FGF4P08620 206 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 CPN1P15169 458 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 IL12BP29460 328 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 NTSP30990 170 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 KRT20P35900 424 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 GAS1P54826 345 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 UGT3A2Q3SY77 523 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 WDR93Q6P2C0 686 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 TMEM107Q6UX40 140 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 PLCZ1Q86YW0 608 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 HOMEZQ8IX15 550 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 IGFBPL1Q8WX77 278 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 ELP4Q96EB1 424 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 FAM111AQ96PZ2 611 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 CCT7Q99832 543 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 IQCGQ9H095 443 aaKnown RBP14.34□□□□□ -0.11
CHRD-213ENST00000482014 MRPS18CQ9Y3D5 142 aaKnown RBP14.34□□□□□ -0.11
CHRD-213ENST00000482014 WIF1Q9Y5W5 379 aa14.34□□□□□ -0.11
CHRD-213ENST00000482014 KIAA1549Q9HCM3 1950 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 A8MXE2 369 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 B4DXG7 233 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 LSM1O15116 133 aaKnown RBP14.33□□□□□ -0.12
CHRD-213ENST00000482014 SPRY1O43609 319 aaPredicted RBP14.33□□□□□ -0.12
CHRD-213ENST00000482014 CHRNGP07510 517 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 LINC00032P0C843 101 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 NEFHP12036 1026 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 CYP4B1P13584 511 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 SDC1P18827 310 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 NR1H2P55055 460 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 GFRA1P56159 465 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 MRPS22P82650 360 aaKnown RBP14.33□□□□□ -0.12
CHRD-213ENST00000482014 ZNF155Q12901 538 aaPredicted RBP14.33□□□□□ -0.12
CHRD-213ENST00000482014 CYP27C1Q4G0S4 372 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 RFTN2Q52LD8 501 aaPredicted RBP14.33□□□□□ -0.12
CHRD-213ENST00000482014 ARL13AQ5H913 290 aaPredicted RBP14.33□□□□□ -0.12
CHRD-213ENST00000482014 EMBQ6PCB8 327 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 C9orf106Q8NAJ2 232 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 ZPLD1Q8TCW7 415 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 TCP10LQ8TDR4 215 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 CAVIN3Q969G5 261 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 EFHD2Q96C19 240 aaPredicted RBP14.33□□□□□ -0.12
CHRD-213ENST00000482014 WFIKKN1Q96NZ8 548 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 TM9SF2Q99805 663 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 MED18Q9BUE0 208 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 MECRQ9BV79 373 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 DDX18Q9NVP1 670 aaKnown RBP14.33□□□□□ -0.12
CHRD-213ENST00000482014 FBXL2Q9UKC9 423 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 FIS1Q9Y3D6 152 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 OR10H1Q9Y4A9 318 aa14.33□□□□□ -0.12
CHRD-213ENST00000482014 FADS1O60427 444 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 SPAG7O75391 227 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 CHEK2O96017 543 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 GRK2P25098 689 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 SRD5A2P31213 254 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 IFFO1Q0D2I5 559 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 GAB1Q13480 694 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 ZNF385BQ569K4 471 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 ANKRD26P1Q6NSI1 321 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 ZNF551Q7Z340 670 aaPredicted RBP14.32□□□□□ -0.12
CHRD-213ENST00000482014 TRIM42Q8IWZ5 723 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 OR14L1PQ8NHC6 308 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 HOXB13Q92826 284 aaPredicted RBP14.32□□□□□ -0.12
CHRD-213ENST00000482014 GFM2Q969S9 779 aaKnown RBP14.32□□□□□ -0.12
CHRD-213ENST00000482014 ZBED6CLQ96FA7 236 aaPredicted RBP14.32□□□□□ -0.12
CHRD-213ENST00000482014 LMF2Q9BU23 707 aaKnown RBP14.32□□□□□ -0.12
CHRD-213ENST00000482014 TMEM109Q9BVC6 243 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 TMED5Q9Y3A6 229 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 TRAF6Q9Y4K3 522 aa14.32□□□□□ -0.12
CHRD-213ENST00000482014 TMEM233B4DJY2 109 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 PDPK1O15530 556 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 ZIC3O60481 467 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 RCBTB2O95199 551 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 CREB1P16220 341 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 ARRB2P32121 409 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 GCKP35557 465 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 CPOXP36551 454 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 FRKP42685 505 aaPredicted RBP14.31□□□□□ -0.12
CHRD-213ENST00000482014 FOXF2Q12947 444 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 PDE7AQ13946 482 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 SH2D4BQ5SQS7 431 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 OR5M10Q6IEU7 315 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 BTLAQ7Z6A9 289 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 ADGRE4PQ86SQ3 457 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 OR6Y1Q8NGX8 325 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 TWIST2Q8WVJ9 160 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 ROBO4Q8WZ75 1007 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 CIDECQ96AQ7 238 aaPredicted RBP14.31□□□□□ -0.12
CHRD-213ENST00000482014 TSSK3Q96PN8 268 aa14.31□□□□□ -0.12
CHRD-213ENST00000482014 EML4Q9HC35 981 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms