RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 KDM4EB2RXH2 506 aaPredicted RBP13.62□□□□□ -0.23
PRKN-207ENST00000479615 EEF1E1-BLOC1S5C9J1V9 151 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 SCAMP2O15127 329 aaKnown RBP13.62□□□□□ -0.23
PRKN-207ENST00000479615 TM9SF1O15321 606 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 EEF1E1O43324 174 aaKnown RBP13.62□□□□□ -0.23
PRKN-207ENST00000479615 PEX11AO75192 247 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 ANGPTL1O95841 491 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 EPXP11678 715 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 CD1EP15812 388 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 TBXA2RP21731 343 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 ETV4P43268 484 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 RFX3P48380 749 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 STARP49675 285 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 WNT3P56703 355 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 B3GALT5-AS1P59052 145 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 KRT71Q3SY84 523 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 ZNF385BQ569K4 471 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 C6orf136Q5SQH8 315 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 ANKRD26P1Q6NSI1 321 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 MFSD12Q6NUT3 480 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 SZRD1Q7Z422 152 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 P4HA3Q7Z4N8 544 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 MARCH3Q86UD3 253 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 FNDC5Q8NAU1 212 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 PSMA8Q8TAA3 256 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 ACTRT2Q8TDY3 377 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 OR5P2Q8WZ92 322 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 SLC9A6Q92581 669 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 RMND5BQ96G75 393 aaPredicted RBP13.62□□□□□ -0.23
PRKN-207ENST00000479615 POLDIP3Q9BY77 421 aaKnown RBP13.62□□□□□ -0.23
PRKN-207ENST00000479615 HOXD1Q9GZZ0 328 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 RASSF1Q9NS23 344 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 ZCCHC3Q9NUD5 404 aaKnown RBP13.62□□□□□ -0.23
PRKN-207ENST00000479615 CRIM1Q9NZV1 1036 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 MED11Q9P086 117 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.62□□□□□ -0.23
PRKN-207ENST00000479615 ZNF175Q9Y473 711 aa13.62□□□□□ -0.23
PRKN-207ENST00000479615 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 A0A1W2PQD3 144 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 SLC22A20A6NK97 555 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 A6NNC1 897 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 TMEM233B4DJY2 109 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 SCDO00767 359 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 NDUFB5O43674 189 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 KCNK2O95069 426 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 ZNF17P17021 662 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 C21orf58P58505 322 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 STX5Q13190 355 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 TESK1Q15569 626 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 ZCCHC23Q6ZST2 131 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 LRRC34Q8IZ02 419 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 COX18Q8N8Q8 333 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 OR56A1Q8NGH5 318 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 CLHC1Q8NHS4 586 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 PIK3R3Q92569 461 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 INTS12Q96CB8 462 aaKnown RBP13.61□□□□□ -0.23
PRKN-207ENST00000479615 TUBGCP3Q96CW5 907 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 COQ8BQ96D53 544 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 GIMAP5Q96F15 307 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 DACH2Q96NX9 599 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 RBM24Q9BX46 236 aaKnown RBP13.61□□□□□ -0.23
PRKN-207ENST00000479615 BTBD2Q9BX70 525 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 BHLHE41Q9C0J9 482 aaPredicted RBP13.61□□□□□ -0.23
PRKN-207ENST00000479615 CLEC4MQ9H2X3 399 aaPredicted RBP13.61□□□□□ -0.23
PRKN-207ENST00000479615 PIGUQ9H490 435 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 ASIC5Q9NY37 505 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 ZDHHC2Q9UIJ5 367 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 PACSIN3Q9UKS6 424 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 ACTL7BQ9Y614 415 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 OTOGQ6ZRI0 2925 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 ARHGAP21Q5T5U3 1957 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
PRKN-207ENST00000479615 ANKHD1Q8IWZ3 2542 aaKnown RBP13.6□□□□□ -0.23
PRKN-207ENST00000479615 FREM3P0C091 2139 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 GXYLT2A0PJZ3 443 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 OR2M5A3KFT3 312 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 C7orf72A4D263 438 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 A8MXE2 369 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 MSTNO14793 375 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 SERPINE1P05121 402 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 HMGN2P05204 90 aaKnown RBP13.6□□□□□ -0.23
PRKN-207ENST00000479615 MYZAPP0CAP1 466 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 FCGR2AP12318 317 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 CPA2P48052 419 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 EMX2Q04743 252 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 GRAMD1BQ3KR37 738 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 EXOSC6Q5RKV6 272 aaKnown RBP13.6□□□□□ -0.23
PRKN-207ENST00000479615 IL23RQ5VWK5 629 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 MTERF4Q7Z6M4 381 aaKnown RBP13.6□□□□□ -0.23
PRKN-207ENST00000479615 ZNF527Q8NB42 609 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 AGR3Q8TD06 166 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 ZBTB8AQ96BR9 441 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 FAM120BQ96EK7 910 aaKnown RBP13.6□□□□□ -0.23
PRKN-207ENST00000479615 PARD6BQ9BYG5 372 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 NOP53Q9NZM5 478 aaKnown RBP13.6□□□□□ -0.23
PRKN-207ENST00000479615 NDRG3Q9UGV2 375 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 RAB21Q9UL25 225 aa13.6□□□□□ -0.23
PRKN-207ENST00000479615 FAF1Q9UNN5 650 aaPredicted RBP13.6□□□□□ -0.23
PRKN-207ENST00000479615 ZNF337Q9Y3M9 751 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms