RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CLIC1O00299 241 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ETV2O00321 342 aaPredicted RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 HMGN4O00479 90 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 KIAA0513O60268 411 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 NME2P1O60361 137 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 OR2J2O76002 312 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 SNX4O95219 450 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ALOX5P09917 674 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ACP2P11117 423 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ETS2P15036 469 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 RPS4Y1P22090 263 aaKnown RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 NME2P22392 152 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 CALB2P22676 271 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 CDKN2CP42773 168 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 DLX5P56178 289 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 PMP22Q01453 160 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ZNF155Q12901 538 aaPredicted RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 VEZF1Q14119 521 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 LASP1Q14847 261 aaKnown RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 EXOSC7Q15024 291 aaKnown RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 RGNQ15493 299 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 DUSP5Q16690 384 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ARHGAP11BQ3KRB8 267 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 REP15Q6BDI9 236 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 SLC2A7Q6PXP3 512 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 LRRC74BQ6ZQY2 392 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 GK5Q6ZS86 529 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 SNX32Q86XE0 403 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 CALHM3Q86XJ0 350 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 FITM2Q8N6M3 262 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ZFP62Q8NB50 900 aaPredicted RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 TMEM178AQ8NBL3 297 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 SLC16A11Q8NCK7 471 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ASB15Q8WXK1 588 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 POP5Q969H6 163 aaKnown RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 LRRC58Q96CX6 371 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 THOC1Q96FV9 657 aaKnown RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 TMEM41AQ96HV5 264 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 LURAP1Q96LR2 239 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 DMRTA2Q96SC8 542 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 SPOCK3Q9BQ16 436 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 UTP23Q9BRU9 249 aaKnown RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 INPP5KQ9BT40 448 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 HES7Q9BYE0 225 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 ENKD1Q9H0I2 346 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 SERHL2Q9H4I8 314 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 IL1RL2Q9HB29 575 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 TIMMDC1Q9NPL8 285 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 VAPAQ9P0L0 249 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 BCAP29Q9UHQ4 241 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 KLF13Q9Y2Y9 288 aaPredicted RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 MEMO1Q9Y316 297 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 MRPS18CQ9Y3D5 142 aaKnown RBP8.16□□□□□ -1.1
DDX56-211ENST00000479602 HRH3Q9Y5N1 445 aa8.16□□□□□ -1.1
DDX56-211ENST00000479602 DNAJC13O75165 2243 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 A8MUA0 341 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 A8MUI8 341 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 A8MVJ9 347 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 EVPLLA8MZ36 301 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 MRASO14807 208 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 FADS1O60427 444 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 ZNF354AO60765 605 aaPredicted RBP8.15□□□□□ -1.1
DDX56-211ENST00000479602 KCNK2O95069 426 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 SP1P08047 785 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 ARAFP10398 606 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 IGFBP2P18065 325 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 TBXA2RP21731 343 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 SLC6A2P23975 617 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 GZMMP51124 257 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 POU6F2P78424 691 aaPredicted RBP8.15□□□□□ -1.1
DDX56-211ENST00000479602 PLCXD2Q0VAA5 305 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 FUT5Q11128 374 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 OR1C1Q15619 314 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 ZNF141Q15928 474 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 SPDYE7PQ495Y7 208 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 GLIPR1L2Q4G1C9 344 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 C6orf10Q5SRN2 563 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 DCST2Q5T1A1 773 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 ATAD3BQ5T9A4 648 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 FCRLBQ6BAA4 426 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 SLC25A25Q6KCM7 469 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 SLC30A6Q6NXT4 461 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 FAM180BQ6P0A1 224 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 ERICH5Q6P6B1 374 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 C6orf89Q6UWU4 347 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 TRPM8Q7Z2W7 1104 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 DOLPP1Q86YN1 238 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 GRAMD2AQ8IUY3 354 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 PGAM4Q8N0Y7 254 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 CYP4Z2PQ8N1L4 340 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 COX18Q8N8Q8 333 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 PSD4Q8NDX1 1056 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 SIMC1Q8NDZ2 872 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 FAM71CQ8NEG0 241 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 BHLHE22Q8NFJ8 381 aaPredicted RBP8.15□□□□□ -1.1
DDX56-211ENST00000479602 OR52E4Q8NGH9 312 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 SPPL2AQ8TCT8 520 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 ADAMTS15Q8TE58 950 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 PHF10Q8WUB8 498 aaKnown RBP8.15□□□□□ -1.1
DDX56-211ENST00000479602 TMCO6Q96DC7 493 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms