RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 UBQLN4Q9NRR5 601 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 VAPAQ9P0L0 249 aa24.47■■□□□ 1.51
CCM2-211ENST00000478582 ERRFI1Q9UJM3 462 aaPredicted RBP24.47■■□□□ 1.51
CCM2-211ENST00000478582 FBP2O00757 339 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 SNPHO15079 494 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 UNC5CO95185 931 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 ATP6V1C1P21283 382 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 PPIBP23284 216 aaKnown RBP24.46■■□□□ 1.51
CCM2-211ENST00000478582 ELAVL4P26378 380 aaKnown RBP24.46■■□□□ 1.51
CCM2-211ENST00000478582 CLK3P49761 638 aaKnown RBP24.46■■□□□ 1.51
CCM2-211ENST00000478582 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.46■■□□□ 1.51
CCM2-211ENST00000478582 TIGD3Q6B0B8 471 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 C16orf62Q7Z3J2 963 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 TMEM251Q8N6I4 163 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 PNPT1Q8TCS8 783 aaKnown RBP24.46■■□□□ 1.51
CCM2-211ENST00000478582 GPR137Q96N19 417 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 CCDC106Q9BWC9 280 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 THUMPD1Q9NXG2 353 aaKnown RBP24.46■■□□□ 1.51
CCM2-211ENST00000478582 QPCTLQ9NXS2 382 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 ARMCX1Q9P291 453 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 LIPT1Q9Y234 373 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 WIF1Q9Y5W5 379 aa24.46■■□□□ 1.51
CCM2-211ENST00000478582 BBIP1A8MTZ0 92 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 ALG1L2C9J202 215 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 TFECO14948 347 aaPredicted RBP24.45■■□□□ 1.5
CCM2-211ENST00000478582 MASP1P48740 699 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 FADDQ13158 208 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 FAM109AQ8N4B1 249 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 OR1J4Q8NGS1 313 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 JSRP1Q96MG2 331 aaPredicted RBP24.45■■□□□ 1.5
CCM2-211ENST00000478582 ZNF350Q9GZX5 532 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 ZNF703Q9H7S9 590 aaPredicted RBP24.45■■□□□ 1.5
CCM2-211ENST00000478582 POLE3Q9NRF9 147 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 SDHAF3Q9NRP4 125 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 OSGIN2Q9Y236 505 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 ARL2BPQ9Y2Y0 163 aa24.45■■□□□ 1.5
CCM2-211ENST00000478582 PRAMEF27A3QJZ7 478 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 WIPF3A6NGB9 483 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 NPIPA5E9PKD4 350 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 NPIPB9F8W1W9 429 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 STX11O75558 287 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 WISP2O76076 250 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 OXSR1O95747 527 aaPredicted RBP24.44■■□□□ 1.5
CCM2-211ENST00000478582 FAM107AO95990 144 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 RFPL3SP0C7P2 107 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 RNF224P0DH78 156 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 GP1BBP13224 206 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 FUT5Q11128 374 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 STX5Q13190 355 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 CYLC2Q14093 348 aaPredicted RBP24.44■■□□□ 1.5
CCM2-211ENST00000478582 RGNQ15493 299 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 RUNDC3AQ59EK9 446 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 CMPK2Q5EBM0 449 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 APOOLQ6UXV4 268 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 DHDDSQ86SQ9 333 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 WDSUB1Q8N9V3 476 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 RP9Q8TA86 221 aaKnown RBP24.44■■□□□ 1.5
CCM2-211ENST00000478582 ROPN1LQ96C74 230 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 SAP130Q9H0E3 1048 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 UBQLN3Q9H347 655 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 HHATLQ9HCP6 504 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 B4GALT7Q9UBV7 327 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 NPIPA1Q9UND3 350 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 C15orf41Q9Y2V0 281 aa24.44■■□□□ 1.5
CCM2-211ENST00000478582 A0A1W2PQD3 144 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 C2orf72A6NCS6 295 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 FAM166BA8MTA8 275 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 BMP2P12643 396 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 ETFAP13804 333 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 CRATP43155 626 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 ATP12AP54707 1039 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 FLYWCH1Q4VC44 716 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 SNX32Q86XE0 403 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 ANKS4BQ8N8V4 417 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 OIT3Q8WWZ8 545 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 GNRHR2Q96P88 292 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 TRNT1Q96Q11 434 aaKnown RBP24.43■■□□□ 1.5
CCM2-211ENST00000478582 CGREF1Q99674 301 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 TBL1XR1Q9BZK7 514 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 RTN4RQ9BZR6 473 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 PLSCR2Q9NRY7 297 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 SEC14L3Q9UDX4 400 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 CORO2BQ9UQ03 480 aa24.43■■□□□ 1.5
CCM2-211ENST00000478582 USP9YO00507 2555 aaPredicted RBP24.43■■□□□ 1.5
CCM2-211ENST00000478582 LOC100653049A0A140TA62 436 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 GNB5O14775 395 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 SCO2O43819 266 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 FCMRO60667 390 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 CBR3O75828 277 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 KRT34O76011 436 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 LDLRP01130 860 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 NPPAP01160 153 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 GPX2P18283 190 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 MAGEA5P43359 124 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 DSTNP60981 165 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 NFYCQ13952 458 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 C4orf17Q53FE4 359 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 MARCH3Q86UD3 253 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 PLCZ1Q86YW0 608 aa24.42■■□□□ 1.5
CCM2-211ENST00000478582 ZNF527Q8NB42 609 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms