RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 CDYL2Q8N8U2 506 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 C16orf78Q8WTQ4 265 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 AKAP1Q92667 903 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCM2-210ENST00000478169 BBS4Q96RK4 519 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 HBEGFQ99075 208 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 HDHD5Q9BXW7 423 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 REG4Q9BYZ8 158 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 TBL1XR1Q9BZK7 514 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 ACTR6Q9GZN1 396 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 Q9N2J8 555 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 SIRT5Q9NXA8 310 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 TAS2R7Q9NYW3 318 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 FLRT3Q9NZU0 649 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 C19orf53Q9UNZ5 99 aaPredicted RBP8.64□□□□□ -1.03
CCM2-210ENST00000478169 PLCE1Q9P212 2302 aa8.64□□□□□ -1.03
CCM2-210ENST00000478169 HEATR1Q9H583 2144 aaKnown RBP8.63□□□□□ -1.03
CCM2-210ENST00000478169 A0A087WZY1 265 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 TTC36A6NLP5 189 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 A8MT66 165 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 ADAMDEC1O15204 470 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 CD5LO43866 347 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 PSMG1O95456 288 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 SYNGR4O95473 234 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 ANGPTL1O95841 491 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 TSPAN8P19075 237 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 DDCP20711 480 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 TIA1P31483 386 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCM2-210ENST00000478169 SLC6A8P48029 635 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 SERPINB9P50453 376 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 NCBP2P52298 156 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCM2-210ENST00000478169 ZNHIT3Q15649 155 aaPredicted RBP8.63□□□□□ -1.03
CCM2-210ENST00000478169 TCHHL1Q5QJ38 904 aaPredicted RBP8.63□□□□□ -1.03
CCM2-210ENST00000478169 LGSNQ5TDP6 509 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 GTF2IRD2BQ6EKJ0 949 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 PPP4R4Q6NUP7 873 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 GTF2IRD2Q86UP8 949 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 HIPK1Q86Z02 1210 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 WDR75Q8IWA0 830 aaKnown RBP8.63□□□□□ -1.03
CCM2-210ENST00000478169 OR2L13Q8N349 312 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 TMEM151AQ8N4L1 468 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 STEAP2Q8NFT2 490 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 OR10D3Q8NH80 312 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 FBXW5Q969U6 566 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 C11orf24Q96F05 449 aaPredicted RBP8.63□□□□□ -1.03
CCM2-210ENST00000478169 APIPQ96GX9 242 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 ADGRG7Q96K78 797 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 ZNF382Q96SR6 550 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 TACO1Q9BSH4 297 aaKnown RBP8.63□□□□□ -1.03
CCM2-210ENST00000478169 LMF2Q9BU23 707 aaKnown RBP8.63□□□□□ -1.03
CCM2-210ENST00000478169 FUT8Q9BYC5 575 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 ACPTQ9BZG2 426 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 C3orf14Q9HBI5 128 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 NGBQ9NPG2 151 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 DMGDHQ9UI17 866 aaKnown RBP8.63□□□□□ -1.03
CCM2-210ENST00000478169 GRID1Q9ULK0 1009 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 CLEC4AQ9UMR7 237 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 RNF115Q9Y4L5 304 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 SNX8Q9Y5X2 465 aa8.63□□□□□ -1.03
CCM2-210ENST00000478169 NUP214P35658 2090 aaPredicted RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 CUBNO60494 3623 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 SERTM1A2A2V5 107 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 C7orf72A4D263 438 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 CCDC151A5D8V7 595 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 UPK1AO00322 258 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 SUPT7LO94864 414 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 UTS2O95399 124 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 JUNP05412 331 aaKnown RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 TUBBP07437 444 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 INHBAP08476 426 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 ANXA4P09525 319 aaPredicted RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 IFI6P09912 130 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 SBK3P0C264 359 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 DANCRP0C864 163 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 PABPC4LP0CB38 370 aaKnown RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 CHN1P15882 459 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 TAC1P20366 129 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 HMOX2P30519 316 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 RAC1P63000 192 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 ZNF763Q0D2J5 394 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 CTU2Q2VPK5 515 aaKnown RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 NCMAPQ5T1S8 102 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 PDSS1Q5T2R2 415 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 CPTPQ5TA50 214 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 TMEM107Q6UX40 140 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 DNAJC14Q6Y2X3 702 aaPredicted RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 GPRIN3Q6ZVF9 776 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 ESPNLQ6ZVH7 1005 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 RELL1Q8IUW5 271 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 PHC2Q8IXK0 858 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 GTPBP8Q8N3Z3 284 aaPredicted RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 MAPK1IP1LQ8NDC0 245 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 LILRB1Q8NHL6 650 aaPredicted RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 RAB3IL1Q8TBN0 382 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 METTL6Q8TCB7 284 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 SMAP2Q8WU79 429 aaPredicted RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 TMEM158Q8WZ71 300 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 GTPBP3Q969Y2 492 aaKnown RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 ZBTB8AQ96BR9 441 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 USB1Q9BQ65 265 aaKnown RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 SLCO5A1Q9H2Y9 848 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms