RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 GAL3ST3Q96A11 431 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 YARS2Q9Y2Z4 477 aaKnown RBP10.34□□□□□ -0.75
COL27A1-204ENST00000477421 MIA3Q5JRA6 1907 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 ANK1P16157 1881 aa10.34□□□□□ -0.75
COL27A1-204ENST00000477421 OR2W5A6NFC9 320 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 JUNBP17275 347 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 XCR1P46094 333 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 MAN2A2P49641 1150 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PDX1P52945 283 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 RAB30Q15771 203 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 GXYLT1Q4G148 440 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TP53I3Q53FA7 332 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TRMT12Q53H54 448 aaKnown RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PRSS36Q5K4E3 855 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 IRAK1BP1Q5VVH5 260 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 IL20RBQ6UXL0 311 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ADAMTSL4Q6UY14 1074 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TMPRSS9Q7Z410 1059 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 NKAIN4Q8IVV8 208 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TIGD4Q8IY51 512 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 LAS2Q8IYD9 372 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TOMM5Q8N4H5 51 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 OR10H5Q8NGA6 315 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TMEM239Q8WW34 195 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ACOT11Q8WXI4 607 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 EFHD2Q96C19 240 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 OR52D1Q9H346 318 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 NEK6Q9HC98 313 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ATXN7L1Q9ULK2 861 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 OR2A25A4D2G3 310 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 EIF1AYO14602 144 aaKnown RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 RAD1O60671 282 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 KLHL18O94889 574 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PPP2CBP62714 309 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PPP2CAP67775 309 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 REEP5Q00765 189 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 RHAGQ02094 409 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 DBPQ10586 325 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 CDKN3Q16667 212 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ZNF181Q2M3W8 571 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 INAVAQ3KP66 663 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 MRPL2Q5T653 305 aaKnown RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ACSM5Q6NUN0 579 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 CHST4Q8NCG5 386 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 OR2A1Q8NGT9 310 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 OR2L8Q8NGY9 312 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TMEM255BQ8WV15 326 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 MSLNLQ96KJ4 702 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TIMM29Q9BSF4 260 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PINK1Q9BXM7 581 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ABCG5Q9H222 651 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TP63Q9H3D4 680 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 THSD1Q9NS62 852 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 HSPB11Q9Y547 144 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 FKBP7Q9Y680 259 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 A0A1W2PQ09 198 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 HYAL3O43820 417 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TOXO94900 526 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 IGFALSP35858 605 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 RPL6Q02878 288 aaKnown RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 HYAL4Q2M3T9 481 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 DEFB133Q30KQ1 61 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 NRARPQ7Z6K4 114 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PJA1Q8NG27 643 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 OR52R1Q8NGF1 315 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PHOSPHO2Q8TCD6 241 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TRIM63Q969Q1 353 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 BPIFA2Q96DR5 249 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 RSPRY1Q96DX4 576 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 MYADMQ96S97 322 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 POLDIP3Q9BY77 421 aaKnown RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ERVK-19Q9WJR5 959 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 BRCA1P38398 1863 aaKnown RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TRBV2A0A0J9YWF9 115 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 FAM25EA8MYX2 175 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 NRG2O14511 850 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 LINC01565O15544 149 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 LILRB3O75022 631 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 OR2B3O76000 313 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 DBIP07108 87 aaKnown RBP10.33□□□□□ -0.76
COL27A1-204ENST00000477421 F8A1P23610 371 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 HOXA9P31269 272 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TMEM52BQ4KMG9 183 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 PGBD2Q6P3X8 592 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 TMEM64Q6YI46 380 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 Q6ZNX1 250 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ZER1Q7Z7L7 766 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 SLC37A3Q8NCC5 494 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 OR13C2Q8NGS9 318 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 FAM3CQ92520 227 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 MS4A6EQ96DS6 147 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 ELP4Q96EB1 424 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 C7orf34Q96L11 122 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 FOXN4Q96NZ1 517 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 CSF3RQ99062 836 aa10.33□□□□□ -0.76
COL27A1-204ENST00000477421 RMI1Q9H9A7 625 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms