RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 MATN1P21941 496 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 KRT20P35900 424 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 PRIM2P49643 509 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 STARP49675 285 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 POLR2JP52435 117 aaKnown RBP11.31□□□□□ -0.6
APTX-220ENST00000476858 MVDP53602 400 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 GYS2P54840 703 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 POU6F2P78424 691 aaPredicted RBP11.31□□□□□ -0.6
APTX-220ENST00000476858 EFR3AQ14156 821 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 MAPK11Q15759 364 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 GXYLT1Q4G148 440 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 TBCELQ5QJ74 424 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 DCST2Q5T1A1 773 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 BNC2Q6ZN30 1099 aaPredicted RBP11.31□□□□□ -0.6
APTX-220ENST00000476858 ACAD11Q709F0 780 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 PLCZ1Q86YW0 608 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 MSRB3Q8IXL7 192 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 FADS6Q8N9I5 356 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 OR2M3Q8NG83 312 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 NEIL3Q8TAT5 605 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 DUSP19Q8WTR2 217 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 SLC35G5Q96KT7 338 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 DMRTA2Q96SC8 542 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 SLC35A5Q9BS91 424 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 CCDC28BQ9BUN5 200 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 BTBD2Q9BX70 525 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 LDAHQ9H6V9 325 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 FAM120CQ9NX05 1096 aaKnown RBP11.31□□□□□ -0.6
APTX-220ENST00000476858 ZIM2Q9NZV7 527 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 BTNL2Q9UIR0 455 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 MEMO1Q9Y316 297 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 FAM215AQ9Y5M1 114 aa11.31□□□□□ -0.6
APTX-220ENST00000476858 USP9YO00507 2555 aaPredicted RBP11.31□□□□□ -0.6
APTX-220ENST00000476858 SETXQ7Z333 2677 aaKnown RBP11.3□□□□□ -0.6
APTX-220ENST00000476858 NPIPB9F8W1W9 429 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 AQP7O14520 342 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 KCNH1O95259 989 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ANGPTL1O95841 491 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 BMP7P18075 431 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 UQCRC2P22695 453 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 PLAURQ03405 335 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 CRYZQ08257 329 aaKnown RBP11.3□□□□□ -0.6
APTX-220ENST00000476858 SNTA1Q13424 505 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 TOMM20Q15388 145 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 MAPK14Q16539 360 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 GSTA3Q16772 222 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
APTX-220ENST00000476858 VPS26BQ4G0F5 336 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 PAGE3Q5JUK9 113 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ANXA8L1Q5VT79 327 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ARHGAP11AQ6P4F7 1023 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ARSKQ6UWY0 536 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ZNF621Q6ZSS3 439 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 SEM1Q6ZVN7 128 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 RNF130Q86XS8 419 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 MIER2Q8N344 545 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ADAMTS15Q8TE58 950 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ITLN2Q8WWU7 325 aaPredicted RBP11.3□□□□□ -0.6
APTX-220ENST00000476858 GTF2H4Q92759 462 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ZG16BQ96DA0 208 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 NEURL3Q96EH8 262 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 STACQ99469 402 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 SDF2Q99470 211 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 TMEM120AQ9BXJ8 343 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 UGT2B28Q9BY64 529 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 TRIM8Q9BZR9 551 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 OR2B2Q9GZK3 357 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 PAIP1Q9H074 479 aaKnown RBP11.3□□□□□ -0.6
APTX-220ENST00000476858 ACBD3Q9H3P7 528 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 EXO5Q9H790 373 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 ACKR4Q9NPB9 350 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 DUSP22Q9NRW4 184 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 FAF1Q9UNN5 650 aaPredicted RBP11.3□□□□□ -0.6
APTX-220ENST00000476858 RPH3AQ9Y2J0 694 aaPredicted RBP11.3□□□□□ -0.6
APTX-220ENST00000476858 GTF3C1Q12789 2109 aa11.3□□□□□ -0.6
APTX-220ENST00000476858 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 A0A0G2JND7 137 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 FAM234BA2RU67 622 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 H0YC42 278 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 HMGN4O00479 90 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 NR5A2O00482 541 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 SUSD5O60279 629 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 TNFRSF21O75509 655 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 TBXA2RP21731 343 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 GRNP28799 593 aaKnown RBP11.29□□□□□ -0.6
APTX-220ENST00000476858 MRPL19P49406 292 aaKnown RBP11.29□□□□□ -0.6
APTX-220ENST00000476858 TPD52P55327 224 aaPredicted RBP11.29□□□□□ -0.6
APTX-220ENST00000476858 RPP38P78345 283 aaKnown RBP11.29□□□□□ -0.6
APTX-220ENST00000476858 RBPJQ06330 500 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 SYPL1Q16563 259 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 DPY19L1Q2PZI1 675 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 AGKQ53H12 422 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 ZNF585AQ6P3V2 769 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 ZCCHC12Q6PEW1 402 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 CBLN3Q6UW01 205 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 NATD1Q8N6N6 113 aa11.29□□□□□ -0.6
APTX-220ENST00000476858 ANKFN1Q8N957 763 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms