RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 RNFT1Q5M7Z0 435 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 ZFP1Q6P2D0 407 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 GDF7Q7Z4P5 450 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 GALNT10Q86SR1 603 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 ADGRG5Q8IZF4 528 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 FAM98AQ8NCA5 519 aaKnown RBP12.54□□□□□ -0.4
LINC00173-201ENST00000470091 SIMC1Q8NDZ2 872 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 OR5D16Q8NGK9 328 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 NFKBIDQ8NI38 313 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 ELP5Q8TE02 316 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 RAB8BQ92930 207 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 SLCO4A1Q96BD0 722 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 OTUB1Q96FW1 271 aaPredicted RBP12.54□□□□□ -0.4
LINC00173-201ENST00000470091 FRMD6Q96NE9 622 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 YIPF4Q9BSR8 244 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 OR51I1Q9H343 314 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 C3orf14Q9HBI5 128 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 EQTNQ9NQ60 294 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 NECTIN3Q9NQS3 549 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 MAT2BQ9NZL9 334 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 ZNF835Q9Y2P0 537 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 MEMO1Q9Y316 297 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 CLDN16Q9Y5I7 305 aa12.54□□□□□ -0.4
LINC00173-201ENST00000470091 MAP1AP78559 2803 aaPredicted RBP12.53□□□□□ -0.4
LINC00173-201ENST00000470091 SETD2Q9BYW2 2564 aaPredicted RBP12.53□□□□□ -0.4
LINC00173-201ENST00000470091 ANKRD17O75179 2603 aaKnown RBP12.53□□□□□ -0.4
LINC00173-201ENST00000470091 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 UPK1AO00322 258 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 PLOD2O00469 737 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 CLDN4O14493 209 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 SLC35E2P0CK97 266 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 MATN1P21941 496 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 PSMA4P25789 261 aaKnown RBP12.53□□□□□ -0.4
LINC00173-201ENST00000470091 RFC3P40938 356 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 CYB561P49447 251 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 PRIM2P49643 509 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 HSD17B7P56937 341 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 MGAT2Q10469 447 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 SCARB2Q14108 478 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 MTX3Q5HYI7 312 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 BHLHB9Q6PI77 547 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 DOLPP1Q86YN1 238 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 SIAH3Q8IW03 269 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 FAM86B1Q8N7N1 296 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 ZNF675Q8TD23 568 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 CANT1Q8WVQ1 401 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 GIMAP5Q96F15 307 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 C16orf58Q96GQ5 468 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 LURAP1Q96LR2 239 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 MS4A4EQ96PG1 132 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 DEFB126Q9BYW3 111 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 TMEM38AQ9H6F2 299 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 GORASP2Q9H8Y8 452 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 A4GALTQ9NPC4 353 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 STX18Q9P2W9 335 aaKnown RBP12.53□□□□□ -0.4
LINC00173-201ENST00000470091 MMACHCQ9Y4U1 282 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 F8P00451 2351 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 HIVEP1P15822 2718 aa12.53□□□□□ -0.4
LINC00173-201ENST00000470091 HMGN4O00479 90 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 SERPINA1P01009 418 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 HMGN2P05204 90 aaKnown RBP12.52□□□□□ -0.41
LINC00173-201ENST00000470091 GPIP06744 558 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 OR12D1P0DN82 309 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 ZNF24P17028 368 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 AQP1P29972 269 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 SLC7A1P30825 629 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 PTGER4P35408 488 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 MLF1P58340 268 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 CDK6Q00534 326 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 RBBP4Q09028 425 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 EXOSC7Q15024 291 aaKnown RBP12.52□□□□□ -0.41
LINC00173-201ENST00000470091 PRICKLE4Q2TBC4 344 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 TRMT12Q53H54 448 aaKnown RBP12.52□□□□□ -0.41
LINC00173-201ENST00000470091 MFSD12Q6NUT3 480 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 ENPP6Q6UWR7 440 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 RNF111Q6ZNA4 994 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 Q6ZPB1 254 aaPredicted RBP12.52□□□□□ -0.41
LINC00173-201ENST00000470091 WDR53Q7Z5U6 358 aaPredicted RBP12.52□□□□□ -0.41
LINC00173-201ENST00000470091 ZNF227Q86WZ6 799 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 ST13P4Q8IZP2 240 aaPredicted RBP12.52□□□□□ -0.41
LINC00173-201ENST00000470091 ZNF295-AS1Q8N0V1 137 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 GHDCQ8N2G8 530 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 OR2L13Q8N349 312 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 GOLM1Q8NBJ4 401 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 DUS3LQ96G46 650 aaKnown RBP12.52□□□□□ -0.41
LINC00173-201ENST00000470091 DGAT2Q96PD7 388 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 ALOXE3Q9BYJ1 711 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 RASSF4Q9H2L5 321 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 PNO1Q9NRX1 252 aaKnown RBP12.52□□□□□ -0.41
LINC00173-201ENST00000470091 NTMQ9P121 344 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 AURKCQ9UQB9 309 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 ANGPT4Q9Y264 503 aa12.52□□□□□ -0.41
LINC00173-201ENST00000470091 A0A087WV62 115 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 NME2P1O60361 137 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 SLITRK5O94991 958 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 CLDN14O95500 239 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 CBX7O95931 251 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 BCHEP06276 602 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 NME2P22392 152 aa12.51□□□□□ -0.41
LINC00173-201ENST00000470091 STT3AP46977 705 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms