RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 LACC1Q8IV20 430 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 CDK20Q8IZL9 346 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 LSMEM1Q8N8F7 131 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 BPIFB6Q8NFQ5 453 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 C16orf52Q8NHV5 167 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 FAM81AQ8TBF8 368 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 HSPBAP1Q96EW2 488 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 SENP5Q96HI0 755 aaPredicted RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 LRFN5Q96NI6 719 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 GFM1Q96RP9 751 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 TSC22D3Q99576 134 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 NUDT22Q9BRQ3 303 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 CNPPD1Q9BV87 410 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 YIPF2Q9BWQ6 316 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 RACGAP1Q9H0H5 632 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 RBM38Q9H0Z9 239 aaKnown RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 POLR1BQ9H9Y6 1135 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 SLC25A19Q9HC21 320 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 NECTIN3Q9NQS3 549 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 MAN2C1Q9NTJ4 1040 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 MED17Q9NVC6 651 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 SELENONQ9NZV5 590 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 AKAP7Q9P0M2 348 aaPredicted RBP9.45□□□□□ -0.9
MSH5-213ENST00000468136 ERVK-19Q9WJR5 959 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 OR10H1Q9Y4A9 318 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 U3KQA8 63 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 XIRP2A4UGR9 3374 aa9.45□□□□□ -0.9
MSH5-213ENST00000468136 TP53BP1Q12888 1972 aaPredicted RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 ARID1BQ8NFD5 2236 aaPredicted RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 A0A087WUU8 490 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 IGHV5-10-1A0A0J9YXX1 117 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 C2orf92A0A1B0GVN3 265 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 CLCA1A8K7I4 914 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 NPIPB9F8W1W9 429 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 NTN3O00634 580 aaPredicted RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 KHNYNO15037 678 aaKnown RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 FAM20BO75063 409 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 SEMA7AO75326 666 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 IL33O95760 270 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 IGF2P01344 180 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 IGKV3-11P04433 115 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 HMGN1P05114 100 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 NGFRP08138 427 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 FGF5P12034 268 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 MAOAP21397 527 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 AGXTP21549 392 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 CSTF2P33240 577 aaKnown RBP eCLIP9.44□□□□□ -0.9
MSH5-213ENST00000468136 PTGER1P34995 402 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 GSSP48637 474 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 IDH2P48735 452 aaKnown RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 TMBIM6P55061 237 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 SLC37A1P57057 533 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 BTG2P78543 158 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 CCL7P80098 99 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 DCDP81605 110 aaKnown RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 SRSF5Q13243 272 aaKnown RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 FGFBP1Q14512 234 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 KCNAB1Q14722 419 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 HLA-DQA1Q5Y7H0 255 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 ANKRD34AQ69YU3 496 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 C12orf73Q69YU5 71 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 DBX2Q6ZNG2 339 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 ZER1Q7Z7L7 766 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 PPP1R3BQ86XI6 285 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 RBM45Q8IUH3 476 aaKnown RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 ENTHD1Q8IYW4 607 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 SPARTQ8N0X7 666 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 CYP4Z2PQ8N1L4 340 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 CLIP4Q8N3C7 705 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 EID2Q8N6I1 236 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 TMEM105Q8N8V8 129 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 AGBL5Q8NDL9 886 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 ZNF540Q8NDQ6 660 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 TEX47Q8TBZ9 253 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 IFI44Q8TCB0 444 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 DNAJA4Q8WW22 397 aaPredicted RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 PIK3R3Q92569 461 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 GTPBP3Q969Y2 492 aaKnown RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 TP53INP1Q96A56 240 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 CRELD1Q96HD1 420 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 LCORQ96JN0 433 aaPredicted RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 SLC38A2Q96QD8 506 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 POLDIP3Q9BY77 421 aaKnown RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 SLC26A1Q9H2B4 701 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 ANKRA2Q9H9E1 313 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 EXOSC3Q9NQT5 275 aaKnown RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 UBQLN4Q9NRR5 601 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 RLIMQ9NVW2 624 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 RHCGQ9UBD6 479 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 REV1Q9UBZ9 1251 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 C19orf25Q9UFG5 118 aaPredicted RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 RNF6Q9Y252 685 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 TMEM184BQ9Y519 407 aaPredicted RBP9.44□□□□□ -0.9
MSH5-213ENST00000468136 PI4KAP42356 2102 aa9.44□□□□□ -0.9
MSH5-213ENST00000468136 TECTAO75443 2155 aa9.43□□□□□ -0.9
MSH5-213ENST00000468136 A0A1W2PQM1 296 aa9.43□□□□□ -0.9
MSH5-213ENST00000468136 GXYLT2A0PJZ3 443 aa9.43□□□□□ -0.9
MSH5-213ENST00000468136 CCDC160A6NGH7 325 aa9.43□□□□□ -0.9
MSH5-213ENST00000468136 A8MU76 341 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms