RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 TSPY1Q01534 308 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 ZNF33BQ06732 778 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 FCHO2Q0JRZ9 810 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 ASPHQ12797 758 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 KLRB1Q12918 225 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 DMP1Q13316 513 aaPredicted RBP4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 CUL2Q13617 745 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 SLC39A4Q6P5W5 647 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 ALKBH5Q6P6C2 394 aaKnown RBP4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 SLC27A1Q6PCB7 646 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 WDR59Q6PJI9 974 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 FAM198BQ6UWH4 519 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 MACC1Q6ZN28 852 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 ZBTB49Q6ZSB9 765 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 STXBP4Q6ZWJ1 553 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 ASPGQ86U10 573 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 VSIG1Q86XK7 387 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 CLVS1Q8IUQ0 354 aaPredicted RBP4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 CFAP206Q8IYR0 622 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 NIPA2Q8N8Q9 360 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 ATP6V0D2Q8N8Y2 350 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 LMNTD1Q8N9Z9 388 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 OR56B2PQ8NGI1 322 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 FGFBP3Q8TAT2 258 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 FANK1Q8TC84 345 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 FNDC8Q8TC99 324 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 HTR3CQ8WXA8 447 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 SYN2Q92777 582 aaPredicted RBP4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 SLC35C1Q96A29 364 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 RMND5BQ96G75 393 aaPredicted RBP4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 IFT74Q96LB3 600 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 CFAP57Q96MR6 1250 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 RUNDC3BQ96NL0 473 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 GCOM2Q9BZD3 368 aaPredicted RBP4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 VN1R1Q9GZP7 353 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 MMP28Q9H239 520 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 FAM124BQ9H5Z6 455 aaPredicted RBP4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 NTN4Q9HB63 628 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 A4GALTQ9NPC4 353 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 MYNNQ9NPC7 610 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 SERINC1Q9NRX5 453 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 AGPAT3Q9NRZ7 376 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 NRBP2Q9NSY0 501 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 RHBDL2Q9NX52 303 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 COX16Q9P0S2 106 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 SENP1Q9P0U3 644 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 OSGIN1Q9UJX0 560 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 SLC7A7Q9UM01 511 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 IFT52Q9Y366 437 aa4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 MYO18AQ92614 2054 aaKnown RBP4.5□□□□□ -1.69
CACNA1C-223ENST00000465278 ABCA4P78363 2273 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 ATP8B3O60423 1300 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 TRIP11Q15643 1979 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 DYSFO75923 2080 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 C15orf38-AP3S2A0A0A6YYH1 394 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 SMIM31A0A1B0GVY4 71 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 A0A1W2PRB8 838 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 TTC26A0AVF1 554 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 MBLAC1A4D2B0 266 aaPredicted RBP4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 TMEM150BA6NC51 233 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 PRR32B1ATL7 298 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 ZNF879B4DU55 563 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 H0YCG3 227 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 H3BQF6 201 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 TRIM77I1YAP6 450 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 M0QZ92 97 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 FBP2O00757 339 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 CCL16O15467 120 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 MAGEB3O15480 346 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 TXNL1O43396 289 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 CALUO43852 315 aaPredicted RBP4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 SLC22A3O75751 556 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 C22orf31O95567 290 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 IL6P05231 212 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 HOXB6P17509 224 aaKnown RBP4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 GLRA2P23416 452 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 MPZP25189 248 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 MAGEA11P43364 429 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 CCT3P49368 545 aaKnown RBP4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 CASP4P49662 377 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 RAP1GDS1P52306 607 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 HNRNPFP52597 415 aaKnown RBP4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 SLC26A5P58743 744 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 KRTAP10-9P60411 292 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 ATP6V0D1P61421 351 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 RELAQ04206 551 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 RBPJQ06330 500 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 RAD51Q06609 339 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 EMC2Q15006 297 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 PPA1Q15181 289 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 ZC2HC1CQ53FD0 456 aaPredicted RBP4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 TECRLQ5HYJ1 363 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 WDR38Q5JTN6 314 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 DCAF10Q5QP82 559 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 PPM1LQ5SGD2 360 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 C1orf220Q5T0J3 134 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 METTL21CQ5VZV1 264 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 PLA2G4FQ68DD2 849 aa4.49□□□□□ -1.69
CACNA1C-223ENST00000465278 KRT80Q6KB66 452 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms