RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 OR2L5Q8NG80 312 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 FATE1Q969F0 183 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 SLC35B4Q969S0 331 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 LMF1Q96S06 567 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 RAD9AQ99638 391 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 ARL6Q9H0F7 186 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 SLC6A15Q9H2J7 730 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 TRPV4Q9HBA0 871 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 SIRT5Q9NXA8 310 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 GRHPRQ9UBQ7 328 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 COPS7AQ9UBW8 275 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 LOXHD1Q8IVV2 1947 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 ZNF670-ZNF695F2Z2N8 137 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 ADAM23O75077 832 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 GTF2F2P13984 249 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 HIST1H1TP22492 207 aaPredicted RBP8.54□□□□□ -1.04
HPS4-208ENST00000464362 EIF2DP41214 584 aaKnown RBP8.54□□□□□ -1.04
HPS4-208ENST00000464362 OC90Q02509 493 aaPredicted RBP8.54□□□□□ -1.04
HPS4-208ENST00000464362 IRF5Q13568 498 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 RUNX3Q13761 415 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 OXA1LQ15070 435 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 ITPRIPL2Q3MIP1 535 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 CCDC58Q4VC31 144 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 PRSS36Q5K4E3 855 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 ATAD3CQ5T2N8 411 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 XKRXQ6PP77 449 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 NUP54Q7Z3B4 507 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 MSRB3Q8IXL7 192 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 SDR16C5Q8N3Y7 309 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 OR52D1Q9H346 318 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 DNMT3BQ9UBC3 853 aaKnown RBP8.54□□□□□ -1.04
HPS4-208ENST00000464362 MED16Q9Y2X0 877 aa8.54□□□□□ -1.04
HPS4-208ENST00000464362 RBM7Q9Y580 266 aaKnown RBP8.54□□□□□ -1.04
HPS4-208ENST00000464362 ZNFX1Q9P2E3 1918 aaKnown RBP8.54□□□□□ -1.04
HPS4-208ENST00000464362 A0A0G2JPF8 293 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 GXYLT2A0PJZ3 443 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 TVP23AA6NH52 213 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 HNRNPCL3B7ZW38 293 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 PRKYO43930 277 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 HNRNPCL4P0DMR1 293 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 PRKACAP17612 351 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 GIFP27352 417 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 SLC6A9P48067 706 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 RACK1P63244 317 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 ERV3-1Q14264 604 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 GXYLT1Q4G148 440 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 ENTPD8Q5MY95 495 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 AGAP7PQ5VUJ5 663 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 FAM205BPQ63HN1 556 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 FIGLAQ6QHK4 219 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 FAM111BQ6SJ93 734 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 DPPA4Q7L190 304 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 CPXM2Q8N436 756 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 FKBP10Q96AY3 582 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 ACTRT3Q9BYD9 372 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 C14orf105Q9NVL8 296 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 EMC3Q9P0I2 261 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 NDRG4Q9ULP0 352 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 PLEKHM1Q9Y4G2 1056 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 IER3IP1Q9Y5U9 82 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 TRAPPC13A5PLN9 417 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 OR2AT4A6NND4 320 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 SOCS6O14544 535 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 RNF13O43567 381 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 RGS9O75916 674 aaPredicted RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 PAHP00439 452 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 ITGB8P26012 769 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 MLLT3P42568 568 aaPredicted RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 MAGEA2P43356 314 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 SLC7A9P82251 487 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 DECR1Q16698 335 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 LRIF1Q5T3J3 769 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 PTOV1Q86YD1 416 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 PRR22Q8IZ63 422 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 BOLLQ8N9W6 283 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 ISG20Q96AZ6 181 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 ARRDC3Q96B67 414 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 DUS3LQ96G46 650 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 INSM2Q96T92 566 aaPredicted RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 ARPC5LQ9BPX5 153 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 GPR174Q9BXC1 333 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 TXNL4BQ9NX01 149 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 TMEM5Q9Y2B1 443 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 NTNG1Q9Y2I2 539 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 HCFC2Q9Y5Z7 792 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 COL24A1Q17RW2 1714 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 CPED1A4D0V7 1026 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 PLPP1O14494 284 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 UBXN7O94888 489 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 LIPCP11150 499 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 APEHP13798 732 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 MAOBP27338 520 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 GGTA1PQ4G0N0 100 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 NRSN1Q8IZ57 195 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 ALDH16A1Q8IZ83 802 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 ZNF615Q8N8J6 731 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 PLA2G15Q8NCC3 412 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 OR56A3Q8NH54 315 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms