RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 TMEM220Q6QAJ8 160 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 SCARA5Q6ZMJ2 495 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 Q6ZPB1 254 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 CCDC80Q76M96 950 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 CPEB2Q7Z5Q1 589 aaKnown RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF584Q8IVC4 421 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 C11orf53Q8IXP5 236 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 CCDC36Q8IYA8 594 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ASCC1Q8N9N2 400 aaKnown RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 OR1L3Q8NH93 324 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 LKAAEAR1Q8TD35 194 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ASZ1Q8WWH4 475 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 PIBF1Q8WXW3 757 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 P3H4Q92791 437 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 MSANTD3Q96H12 275 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 SLC45A3Q96JT2 553 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 C7orf34Q96L11 122 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 VSTM2LQ96N03 204 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 RBM24Q9BX46 236 aaKnown RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 BBS2Q9BXC9 721 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 GSDMCQ9BYG8 508 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 LRRC2Q9BYS8 371 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ANKRD60Q9BZ19 345 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 DNTTIP1Q9H147 329 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 RGCCQ9H4X1 137 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ACTL8Q9H568 366 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 DCTPP1Q9H773 170 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 C10orf88Q9H8K7 445 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 NRBP2Q9NSY0 501 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 NDE1Q9NXR1 346 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF346Q9UL40 294 aaKnown RBP3.34□□□□□ -1.87
ITGB1-208ENST00000464001 TBC1D24Q9ULP9 559 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ERVK-19Q9WJR5 959 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 NSG2Q9Y328 171 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 RHBDD3Q9Y3P4 386 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 CSNK1G3Q9Y6M4 447 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 MYO3BQ8WXR4 1341 aa3.34□□□□□ -1.87
ITGB1-208ENST00000464001 ATP10DQ9P241 1426 aa3.34□□□□□ -1.88
ITGB1-208ENST00000464001 ERICH2A1L162 156 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 SNTNA6NMZ2 147 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 C12orf71A8MTZ7 269 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 HAS3O00219 553 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 PSMD11O00231 422 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 CHEK1O14757 476 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 JAK2O60674 1132 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 CLN5O75503 358 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 KRT6AP02538 564 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 STAG3L2P0CL84 134 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 TROVE2P10155 538 aaKnown RBP eCLIP3.33□□□□□ -1.88
ITGB1-208ENST00000464001 TSPAN8P19075 237 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 CYP2B6P20813 491 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 NT5EP21589 574 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 CTNNA2P26232 953 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 MNDAP41218 407 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 MAGEA8P43361 318 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 GEMP55040 296 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 C21orf59P57076 290 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 RPP38P78345 283 aaKnown RBP3.33□□□□□ -1.88
ITGB1-208ENST00000464001 GUCY2DQ02846 1103 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 EXOSC7Q15024 291 aaKnown RBP3.33□□□□□ -1.88
ITGB1-208ENST00000464001 TGFBIQ15582 683 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 AANATQ16613 207 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 ZSWIM7Q19AV6 140 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 PARP6Q2NL67 630 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 HNRNPA1L2Q32P51 320 aaKnown RBP3.33□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF829Q3KNS6 432 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-208ENST00000464001 LINC01620Q4KN68 170 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 ARMCX4Q5H9R4 360 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 CTSL3PQ5NE16 218 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 HIST2H2AA3Q6FI13 130 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 TMEM225Q6GV28 225 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 FUT10Q6P4F1 479 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 C6orf89Q6UWU4 347 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF841Q6ZN19 808 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 CENPUQ71F23 418 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 EIF3MQ7L2H7 374 aaKnown RBP3.33□□□□□ -1.88
ITGB1-208ENST00000464001 PAQR7Q86WK9 346 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 HPS6Q86YV9 775 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 MMD2Q8IY49 270 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 OR11H4Q8NGC9 324 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 OR10Q1Q8NGQ4 319 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 CLHC1Q8NHS4 586 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 LRRC15Q8TF66 581 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 DDI1Q8WTU0 396 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 GATAD1Q8WUU5 269 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 MITD1Q8WV92 249 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 SPRYD4Q8WW59 207 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-208ENST00000464001 SEPT8Q92599 483 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 RBM41Q96IZ5 413 aaKnown RBP3.33□□□□□ -1.88
ITGB1-208ENST00000464001 PRRC1Q96M27 445 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 FAM20AQ96MK3 541 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 SHARPINQ9H0F6 387 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 GANQ9H2C0 597 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 MARCH7Q9H992 704 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF160Q9HCG1 818 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 SLC2A8Q9NY64 477 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 AHSPQ9NZD4 102 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 PTTG3PQ9NZH4 202 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 PIGLQ9Y2B2 252 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 PTPRUQ92729 1446 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms