RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 CHDHQ8NE62 594 aaPredicted RBP16.1■□□□□ 0.17
VPS52-214ENST00000463486 FAM83FQ8NEG4 500 aaPredicted RBP16.1■□□□□ 0.17
VPS52-214ENST00000463486 PANX1Q96RD7 426 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 DMRTA2Q96SC8 542 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 OR2B2Q9GZK3 357 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 PCNX3Q9H6A9 2034 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 NPIPA2E9PIF3 369 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 NPIPA3F8WFD2 350 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 CCL21O00585 134 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 SCO2O43819 266 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 OXSR1O95747 527 aaPredicted RBP16.09■□□□□ 0.17
VPS52-214ENST00000463486 MDH1P40925 334 aaKnown RBP16.09■□□□□ 0.17
VPS52-214ENST00000463486 FUT5Q11128 374 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 RCAN2Q14206 197 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 TIGD2Q4W5G0 525 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 NHSL2Q5HYW2 709 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 DCST2Q5T1A1 773 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 C3P1Q6ZMU1 363 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 CD163Q86VB7 1156 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 OR2M3Q8NG83 312 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 DUSP19Q8WTR2 217 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 GTF2H4Q92759 462 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 CCDC120Q96HB5 630 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 ZNF317Q96PQ6 595 aaPredicted RBP16.09■□□□□ 0.17
VPS52-214ENST00000463486 SDF2Q99470 211 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 SIKE1Q9BRV8 207 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 SLC35A5Q9BS91 424 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 G6PC3Q9BUM1 346 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 OR51I1Q9H343 314 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 PNPLA3Q9NST1 481 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 FGFR1OP2Q9NVK5 253 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 TMEM45AQ9NWC5 275 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 KCNE5Q9UJ90 142 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 SH3BGRL2Q9UJC5 107 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 MEMO1Q9Y316 297 aa16.09■□□□□ 0.17
VPS52-214ENST00000463486 MRPS18CQ9Y3D5 142 aaKnown RBP16.09■□□□□ 0.17
VPS52-214ENST00000463486 PRRG2O14669 202 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 FCMRO60667 390 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 ZG16O60844 167 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 TRAPPC6AO75865 159 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 ANGPTL1O95841 491 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 TPOP07202 933 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 ZCCHC18P0CG32 403 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 IRX1P78414 480 aaPredicted RBP16.08■□□□□ 0.16
VPS52-214ENST00000463486 ADORA2A-AS1P86434 159 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 CRYZQ08257 329 aaKnown RBP16.08■□□□□ 0.16
VPS52-214ENST00000463486 KLHL26Q53HC5 615 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 WIPI1Q5MNZ9 446 aaPredicted RBP16.08■□□□□ 0.16
VPS52-214ENST00000463486 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.08■□□□□ 0.16
VPS52-214ENST00000463486 VASNQ6EMK4 673 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 ZNF621Q6ZSS3 439 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 NCCRP1Q6ZVX7 275 aaPredicted RBP16.08■□□□□ 0.16
VPS52-214ENST00000463486 OLIG3Q7RTU3 272 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 YRDCQ86U90 279 aaKnown RBP16.08■□□□□ 0.16
VPS52-214ENST00000463486 RPRMLQ8N4K4 120 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 MARVELD2Q8N4S9 558 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 ZFP90Q8TF47 636 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 SLC35G5Q96KT7 338 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 KLHDC3Q9BQ90 382 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 DSN1Q9H410 356 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 UBQLN4Q9NRR5 601 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 MED11Q9P086 117 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 SLC6A5Q9Y345 797 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 PCDHGB3Q9Y5G1 929 aa16.08■□□□□ 0.16
VPS52-214ENST00000463486 NCOA6Q14686 2063 aaPredicted RBP16.07■□□□□ 0.16
VPS52-214ENST00000463486 A0A0G2JND7 137 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 DUXAA6NLW8 204 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 E9PLN8 166 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 HMGN4O00479 90 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 RFXANKO14593 260 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 BCKDKO14874 412 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 GUSBP08236 651 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 OR12D1P0DN82 309 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 CAPN3P20807 821 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 SRD5A2P31213 254 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 GFRA1P56159 465 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 B3GALT5-AS1P59052 145 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 CD226Q15762 336 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 ARHGAP11BQ3KRB8 267 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 GTDC1Q4AE62 458 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 COX20Q5RI15 118 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 DCST1Q5T197 706 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 RTL6Q6ICC9 239 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 SLC2A7Q6PXP3 512 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 RNF130Q86XS8 419 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 OR5M9Q8NGP3 310 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 RAB8BQ92930 207 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 CHMP6Q96FZ7 201 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 TIMP4Q99727 224 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 VKORC1Q9BQB6 163 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 PAIP1Q9H074 479 aaKnown RBP16.07■□□□□ 0.16
VPS52-214ENST00000463486 LDAHQ9H6V9 325 aa16.07■□□□□ 0.16
VPS52-214ENST00000463486 NPIPA5A0A0B4J1W7 369 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 A0A1W2PQD3 144 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 NPIPA7E9PJI5 369 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 NPIPA8P0DM63 369 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 BMP7P18075 431 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 STX1BP61266 288 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 C17orf67Q0P5P2 114 aa16.06■□□□□ 0.16
VPS52-214ENST00000463486 STX5Q13190 355 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms