RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 PODNL1Q6PEZ8 512 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 ESPNLQ6ZVH7 1005 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 TDRPQ86YL5 185 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 MISPQ8IVT2 679 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 CTAGE4Q8IX94 777 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 TMEM151AQ8N4L1 468 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 STEAP2Q8NFT2 490 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 ROBO4Q8WZ75 1007 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 KAT2AQ92830 837 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 FBXW5Q969U6 566 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 HDHD5Q9BXW7 423 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 ACTR6Q9GZN1 396 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 MYNNQ9NPC7 610 aa13.03□□□□□ -0.32
DNMT3A-207ENST00000461228 H0YC42 278 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 CD5LO43866 347 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 ULK1O75385 1050 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 PLGP00747 810 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 TUBBP07437 444 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 SBK3P0C264 359 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 DANCRP0C864 163 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 PABPC4LP0CB38 370 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 PSMA4P25789 261 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 AGTR1P30556 359 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 NTSP30990 170 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 TPD52P55327 224 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 PKNOX1P55347 436 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 CTBP2P56545 445 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 NAA20P61599 178 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 LCP2Q13094 533 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 GPRIN3Q6ZVF9 776 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 WDR75Q8IWA0 830 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 OR4N2Q8NGD1 307 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 RNF128Q8TEB7 428 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 EXOSC8Q96B26 276 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 TRMT61AQ96FX7 289 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 ZC3HAV1LQ96H79 300 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 PAFAH2Q99487 392 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 TACO1Q9BSH4 297 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 TBL1XR1Q9BZK7 514 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 KLHL4Q9C0H6 718 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 ANKRA2Q9H9E1 313 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 BARX1Q9HBU1 254 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 NGBQ9NPG2 151 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 DDX18Q9NVP1 670 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 RNF115Q9Y4L5 304 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 FREM1Q5H8C1 2179 aa13.02□□□□□ -0.33
DNMT3A-207ENST00000461228 NPIPB8E9PQR5 432 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 KIF2AO00139 706 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 UPK1AO00322 258 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 OR4F21O95013 312 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 KCNH1O95259 989 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 HSPA4LO95757 839 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 HSD17B3P37058 310 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 MAP3K8P41279 467 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 RAC1P63000 192 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 MRPS25P82663 173 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 ZNF844Q08AG5 666 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 C2orf54Q08AI8 447 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 TNK1Q13470 666 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 RNPS1Q15287 305 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 UAP1Q16222 522 aaPredicted RBP13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 CLEC12BQ2HXU8 276 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 VPS26BQ4G0F5 336 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 SGO1Q5FBB7 561 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 ZNF678Q5SXM1 525 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 FAM180BQ6P0A1 224 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 HIPK1Q86Z02 1210 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 GABRG1Q8N1C3 465 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 CDYL2Q8N8U2 506 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 OR10D3Q8NH80 312 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 C16orf78Q8WTQ4 265 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 NANOS1Q8WY41 292 aaKnown RBP13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 L3HYPDHQ96EM0 354 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 PLPPR2Q96GM1 343 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 HBEGFQ99075 208 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 POTEKPQ9BYX7 375 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 RTN4RQ9BZR6 473 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 MIEF1Q9NQG6 463 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 TMEM160Q9NX00 188 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 NINJ2Q9NZG7 142 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 MED11Q9P086 117 aa13.01□□□□□ -0.33
DNMT3A-207ENST00000461228 UQCRHLA0A096LP55 91 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 GOLGA8QA0A0J9YX86 632 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 A0A1W2PQD3 144 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 GOLGA8OA6NCC3 632 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 C17orf51A8MQB3 221 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 GOLGA8NF8WBI6 632 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 GOLGA8RI6L899 631 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 PPP6CO00743 305 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 GCM2O75603 506 aaPredicted RBP13□□□□□ -0.33
DNMT3A-207ENST00000461228 ANGPTL1O95841 491 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 TAC1P20366 129 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 HMOX2P30519 316 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 IDUAP35475 653 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 EIF1AXP47813 144 aaKnown RBP13□□□□□ -0.33
DNMT3A-207ENST00000461228 CDH13P55290 713 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 VEZF1Q14119 521 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 SLC29A2Q14542 456 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 SGCBQ16585 318 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms