RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 NUDT13Q86X67 352 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 GHDCQ8N2G8 530 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 Q8N402 240 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 LCN9Q8WX39 176 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 FRMD6Q96NE9 622 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 A4GALTQ9NPC4 353 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 GIMAP4Q9NUV9 329 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 SF3B6Q9Y3B4 125 aaKnown RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 GRIP1Q9Y3R0 1128 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 ATG4BQ9Y4P1 393 aa11.61□□□□□ -0.55
LINC00959-201ENST00000456581 TP53BP1Q12888 1972 aaPredicted RBP11.61□□□□□ -0.55
LINC00959-201ENST00000456581 CACNA1CQ13936 2221 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 LIMS3P0CW19 117 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 LIMS4P0CW20 117 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 CPEP16870 476 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 CELP19835 753 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 TEAD1P28347 426 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 ASAH1Q13510 395 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 IL18Q14116 193 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 DDI2Q5TDH0 399 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 NR2C2APQ86WQ0 139 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 ZNF761Q86XN6 746 aaPredicted RBP11.6□□□□□ -0.55
LINC00959-201ENST00000456581 VWA5B2Q8N398 1253 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 MORN4Q8NDC4 146 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 KCTD7Q96MP8 289 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 TBX5Q99593 518 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 C1QTNF7Q9BXJ2 289 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 GLIPR2Q9H4G4 154 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 C6orf106Q9H6K1 298 aaPredicted RBP11.6□□□□□ -0.55
LINC00959-201ENST00000456581 ACOXLQ9NUZ1 547 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 NPAP1Q9NZP6 1156 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 DIMT1Q9UNQ2 313 aaKnown RBP11.6□□□□□ -0.55
LINC00959-201ENST00000456581 MTCH2Q9Y6C9 303 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 ASXL3Q9C0F0 2248 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 DNAJB6O75190 326 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 SLC2A2P11168 524 aaPredicted RBP11.6□□□□□ -0.55
LINC00959-201ENST00000456581 MYL12AP19105 171 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 WNT4P56705 351 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 PCBP4P57723 403 aaKnown RBP11.6□□□□□ -0.55
LINC00959-201ENST00000456581 ELOAQ14241 798 aaKnown RBP11.6□□□□□ -0.55
LINC00959-201ENST00000456581 MEDAGQ5VYS4 303 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 TIGD4Q8IY51 512 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 TBC1D19Q8N5T2 526 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 FAM160A2Q8N612 972 aaPredicted RBP11.6□□□□□ -0.55
LINC00959-201ENST00000456581 SIMC1Q8NDZ2 872 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 OR5H6Q8NGV6 325 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 SETD6Q8TBK2 473 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 MS4A6EQ96DS6 147 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 WDFY2Q96P53 400 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 SAP130Q9H0E3 1048 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 MCUBQ9NWR8 336 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 APOBEC3BQ9UH17 382 aaKnown RBP11.6□□□□□ -0.55
LINC00959-201ENST00000456581 NCKAP1Q9Y2A7 1128 aa11.6□□□□□ -0.55
LINC00959-201ENST00000456581 A0A087WUU8 490 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 A0A0A6YYD5 115 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 A0A1W2PR48 441 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 SYNDIG1LA6NDD5 238 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ARRDC5A6NEK1 342 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 C12orf71A8MTZ7 269 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 PIP5K1CO60331 668 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 TFPIP10646 304 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 PEPDP12955 493 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ENPP1P22413 925 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 GPR4P46093 362 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 RNASE12Q5GAN4 147 aaKnown RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 FAM27D1Q5T7N8 215 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 VRK2Q86Y07 508 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 CCDC116Q8IYX3 515 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 RDH10Q8IZV5 341 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 OR10G6Q8NH81 332 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 RLN3Q8WXF3 142 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 GAS2L1Q99501 681 aaPredicted RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 WACQ9BTA9 647 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ZSCAN32Q9NX65 697 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 NDOR1Q9UHB4 597 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ENOPH1Q9UHY7 261 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 CSNK1G3Q9Y6M4 447 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 CACNA1IQ9P0X4 2223 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 PAHP00439 452 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 GNSP15586 552 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 TRHRP34981 398 aaPredicted RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 SLC9A3P48764 834 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 NCBP2P52298 156 aaKnown RBP eCLIP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 STXBP1P61764 594 aaKnown RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 NFATC4Q14934 902 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ALG11Q2TAA5 492 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 BTBD16Q32M84 506 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 MTFR2Q6P444 385 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 XKRXQ6PP77 449 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 TMEM107Q6UX40 140 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ZNF730Q6ZMV8 503 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 AMIGO1Q86WK6 493 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 TRIM69Q86WT6 500 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 ACOT4Q8N9L9 421 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 OR13H1Q8NG92 308 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 OR5P2Q8WZ92 322 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 FGF11Q92914 225 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 SCARF2Q96GP6 870 aaPredicted RBP11.59□□□□□ -0.55
LINC00959-201ENST00000456581 SLC35G5Q96KT7 338 aa11.59□□□□□ -0.55
LINC00959-201ENST00000456581 QRFPRQ96P65 431 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms