RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 ASXL3Q9C0F0 2248 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 SLC34A2O95436 690 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 NTN1O95631 604 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 IGKV1D-16P01601 117 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 CLPSP04118 112 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 MASP1P48740 699 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 PGDP52209 483 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 BIKQ13323 160 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 SQSTM1Q13501 440 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 DSG2Q14126 1118 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 NR0B2Q15466 257 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 C12orf73Q69YU5 71 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 GUSBP11Q6P575 273 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 NPSR1Q6W5P4 371 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 TMPRSS9Q7Z410 1059 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 GDF7Q7Z4P5 450 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 NKAIN4Q8IVV8 208 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 GPR135Q8IZ08 494 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 ZNF501Q96CX3 271 aaPredicted RBP16.42■□□□□ 0.22
LMNA-208ENST00000448611 SLC41A3Q96GZ6 507 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 NAA50Q9GZZ1 169 aaKnown RBP16.42■□□□□ 0.22
LMNA-208ENST00000448611 LIN28AQ9H9Z2 209 aaKnown RBP16.42■□□□□ 0.22
LMNA-208ENST00000448611 ERVK-19Q9WJR5 959 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 MMACHCQ9Y4U1 282 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 CABIN1Q9Y6J0 2220 aa16.42■□□□□ 0.22
LMNA-208ENST00000448611 H3BN98 237 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 TOX3O15405 576 aaPredicted RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 MPZL2O60487 215 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 INMTO95050 263 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 IFNA16P05015 189 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 PRG2P13727 222 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 GSTM3P21266 225 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 MAP2K4P45985 399 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 GP2P55259 537 aaKnown RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 PLAURQ03405 335 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 DECR1Q16698 335 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 TMEM71Q6P5X7 295 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 ZNF730Q6ZMV8 503 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 ZNF574Q6ZN55 896 aaPredicted RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 ZNF615Q8N8J6 731 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 C16orf52Q8NHV5 167 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 ACOT11Q8WXI4 607 aaPredicted RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 MPP4Q96JB8 637 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 PTCHD1Q96NR3 888 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 NDC1Q9BTX1 674 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 OR10A5Q9H207 317 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 SERTAD3Q9UJW9 196 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 FBXO4Q9UKT5 387 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 ADAMTS20P59510 1910 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 IGKV3D-11A0A0A0MRZ8 115 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 ENO4A6NNW6 628 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 CLCA1A8K7I4 914 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 ZNF99A8MXY4 864 aaPredicted RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 SIGLEC6O43699 453 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 BCAS1O75363 584 aaPredicted RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 TRMUO75648 421 aaKnown RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 HTR2AP28223 471 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 IFNGR2P38484 337 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 ANGPT1Q15389 498 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 FLYWCH1Q4VC44 716 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 PERM1Q5SV97 790 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 PRICKLE2Q7Z3G6 844 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 RANBP3LQ86VV4 465 aaPredicted RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 RCBTB1Q8NDN9 531 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 TOR1AIP2Q8NFQ8 470 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 GGHQ92820 318 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 COPS4Q9BT78 406 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 YIPF2Q9BWQ6 316 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 POLR2J2Q9GZM3 115 aaKnown RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 AMBNQ9NP70 447 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 FGF21Q9NSA1 209 aa16.41■□□□□ 0.22
LMNA-208ENST00000448611 ATXN7L1Q9ULK2 861 aaPredicted RBP16.41■□□□□ 0.22
LMNA-208ENST00000448611 CPED1A4D0V7 1026 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 H3BMQ9 156 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 DSCR3O14972 297 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 CT45A8P0DMV1 189 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 CT45A9P0DMV2 189 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 TNNI3P19429 210 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 ACVR2AP27037 513 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 OMPP47874 163 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 NUDT6P53370 316 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 MVKQ03426 396 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 CT45A2Q5DJT8 189 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 QSOX2Q6ZRP7 698 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 PTCHD4Q6ZW05 846 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 ERI1Q8IV48 349 aaKnown RBP16.4■□□□□ 0.22
LMNA-208ENST00000448611 SVOPQ8N4V2 548 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 FAM181AQ8N9Y4 354 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 GNPDA2Q8TDQ7 276 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 PTPMT1Q8WUK0 201 aaPredicted RBP16.4■□□□□ 0.22
LMNA-208ENST00000448611 COG8Q96MW5 612 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 ZNF304Q9HCX3 659 aa16.4■□□□□ 0.22
LMNA-208ENST00000448611 A0A1W2PQM1 296 aa16.39■□□□□ 0.21
LMNA-208ENST00000448611 TRIM64BA6NI03 449 aa16.39■□□□□ 0.21
LMNA-208ENST00000448611 C17orf105B2RV13 164 aa16.39■□□□□ 0.21
LMNA-208ENST00000448611 FMO6PO60774 539 aa16.39■□□□□ 0.21
LMNA-208ENST00000448611 CFIP05156 583 aa16.39■□□□□ 0.21
LMNA-208ENST00000448611 GKN3PP0CG01 181 aa16.39■□□□□ 0.21
LMNA-208ENST00000448611 RFX3P48380 749 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms