RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 XKR7Q5GH72 579 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 OR2A2Q6IF42 318 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 MFSD12Q6NUT3 480 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 ZCCHC12Q6PEW1 402 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 PLXDC2Q6UX71 529 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 COX18Q8N8Q8 333 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 FNDC5Q8NAU1 212 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 OR6Y1Q8NGX8 325 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 HOXB13Q92826 284 aaPredicted RBP17.81■□□□□ 0.44
VCP-203ENST00000448530 TUBGCP3Q96CW5 907 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 PRPF18Q99633 342 aaKnown RBP17.81■□□□□ 0.44
VCP-203ENST00000448530 G6PC3Q9BUM1 346 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 C1orf50Q9BV19 199 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 RBM24Q9BX46 236 aaKnown RBP17.81■□□□□ 0.44
VCP-203ENST00000448530 RTN4RQ9BZR6 473 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 CLEC4MQ9H2X3 399 aaPredicted RBP17.81■□□□□ 0.44
VCP-203ENST00000448530 ZCCHC3Q9NUD5 404 aaKnown RBP17.81■□□□□ 0.44
VCP-203ENST00000448530 JKAMPQ9P055 326 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 STOML1Q9UBI4 398 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 EDARQ9UNE0 448 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 F8P00451 2351 aa17.81■□□□□ 0.44
VCP-203ENST00000448530 MPDZO75970 2070 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 OR2M5A3KFT3 312 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 SLC22A20A6NK97 555 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 A6NNC1 897 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 H3BML4 177 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 RGS16O15492 202 aaPredicted RBP17.8■□□□□ 0.44
VCP-203ENST00000448530 SEC14L5O43304 696 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 CTIFO43310 598 aaKnown RBP17.8■□□□□ 0.44
VCP-203ENST00000448530 HCRTR2O43614 444 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 NDUFB5O43674 189 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 TYROBPO43914 113 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 GMFGO60234 142 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 LYPLA1O75608 230 aaPredicted RBP17.8■□□□□ 0.44
VCP-203ENST00000448530 HSPA4LO95757 839 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 IGKV1D-16P01601 117 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 ACP2P11117 423 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 CREB1P16220 341 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 MAP3K8P41279 467 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 SERPINB4P48594 390 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 MLC1Q15049 377 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 GLYR1Q49A26 553 aaPredicted RBP17.8■□□□□ 0.44
VCP-203ENST00000448530 C6orf136Q5SQH8 315 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 CPTPQ5TA50 214 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 FIGNL1Q6PIW4 674 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 GALNT10Q86SR1 603 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 LUZP2Q86TE4 346 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 MREGQ8N565 214 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 NATD1Q8N6N6 113 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 SLC16A11Q8NCK7 471 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 OR7A2PQ8NGA2 310 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 RASSF1Q9NS23 344 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 ZDHHC2Q9UIJ5 367 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 EIF3LQ9Y262 564 aaKnown RBP17.8■□□□□ 0.44
VCP-203ENST00000448530 ZNF337Q9Y3M9 751 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 SNX8Q9Y5X2 465 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 PCNX3Q9H6A9 2034 aa17.8■□□□□ 0.44
VCP-203ENST00000448530 CELSR1Q9NYQ6 3014 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 KCNK2O95069 426 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 EPXP11678 715 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 LCN1P31025 176 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 DNAJA1P31689 397 aaKnown RBP17.79■□□□□ 0.44
VCP-203ENST00000448530 RPS3AP61247 264 aaKnown RBP17.79■□□□□ 0.44
VCP-203ENST00000448530 PTGR1Q14914 329 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 DUSP5Q16690 384 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 LSM12Q3MHD2 195 aaKnown RBP17.79■□□□□ 0.44
VCP-203ENST00000448530 SPDYE7PQ495Y7 208 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 IL23RQ5VWK5 629 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 OR5M1Q8NGP8 315 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 SMPDL3BQ92485 455 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 NRGNQ92686 78 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 FAM120BQ96EK7 910 aaKnown RBP17.79■□□□□ 0.44
VCP-203ENST00000448530 GIMAP5Q96F15 307 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 C3orf30Q96M34 536 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 YIPF4Q9BSR8 244 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 PACSIN3Q9UKS6 424 aa17.79■□□□□ 0.44
VCP-203ENST00000448530 IGLV3-32A0A0A0MS00 114 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 ALG1L2C9J202 215 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 SCDO00767 359 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 OXSR1O95747 527 aaPredicted RBP17.78■□□□□ 0.44
VCP-203ENST00000448530 TGM6O95932 706 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 CRHP06850 196 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 NGFRP08138 427 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 LAMP1P11279 417 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 CD1EP15812 388 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 PRPS1L1P21108 318 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 TBXA2RP21731 343 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 ART1P52961 327 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 POU6F2P78424 691 aaPredicted RBP17.78■□□□□ 0.44
VCP-203ENST00000448530 MAD2L1Q13257 205 aaPredicted RBP17.78■□□□□ 0.44
VCP-203ENST00000448530 DAZAP2Q15038 168 aaPredicted RBP17.78■□□□□ 0.44
VCP-203ENST00000448530 TESK1Q15569 626 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.78■□□□□ 0.44
VCP-203ENST00000448530 APOOLQ6UXV4 268 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 SPNS3Q6ZMD2 512 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 CNEP1R1Q8N9A8 125 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 OR4C3Q8NH37 302 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 OR5P2Q8WZ92 322 aa17.78■□□□□ 0.44
VCP-203ENST00000448530 C16orf58Q96GQ5 468 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms