RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 CYLC2Q14093 348 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF267Q14586 743 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 PRICKLE4Q2TBC4 344 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 TRMT12Q53H54 448 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF628Q5EBL2 1059 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 C6orf10Q5SRN2 563 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 PRAMEF20Q5VT98 475 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 FAM91A1Q658Y4 838 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ULK2Q8IYT8 1036 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 FAM13CQ8NE31 585 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 OR7G2Q8NG99 324 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 OR10G3Q8NGC4 313 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 OR5AK3PQ8NH89 298 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 FBXO27Q8NI29 283 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 OR5P2Q8WZ92 322 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 GTF2H4Q92759 462 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ZBED6CLQ96FA7 236 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 CCDC115Q96NT0 180 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 DOHHQ9BU89 302 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 POLDIP3Q9BY77 421 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 WWTR1Q9GZV5 400 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 CXXC4Q9H2H0 198 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 CXorf21Q9HAI6 301 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ACSS1Q9NUB1 689 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 TMEM45AQ9NWC5 275 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 BTNL2Q9UIR0 455 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 FOXD3Q9UJU5 478 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 CNOT11Q9UKZ1 510 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 ERVK-19Q9WJR5 959 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 NDUFAF1Q9Y375 327 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 SNX8Q9Y5X2 465 aa12.56□□□□□ -0.4
PDLIM2-213ENST00000448520 NCKAP5O14513 1909 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 DVL2O14641 736 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 MRASO14807 208 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 AIM2O14862 343 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 SNX4O95219 450 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 CLPSP04118 112 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 T-ENOLP0DO92 83 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 PTPN6P29350 595 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 MPIP34949 423 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 TIMP3P35625 211 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 CASP9P55211 416 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 RPP38P78345 283 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 CAPRIN1Q14444 709 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 EBPQ15125 230 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 MAPRE2Q15555 327 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 ANXA8L1Q5VT79 327 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 C6orf89Q6UWU4 347 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 GALNT12Q8IXK2 581 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 MSRB3Q8IXL7 192 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 PM20D2Q8IYS1 436 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 ZFP28Q8NHY6 868 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 RP9Q8TA86 221 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 AURKBQ96GD4 344 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 ITCHQ96J02 903 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 JSRP1Q96MG2 331 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 PANX1Q96RD7 426 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 GAL3ST4Q96RP7 486 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 SECISBP2Q96T21 854 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 SLC39A3Q9BRY0 314 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 PAIP1Q9H074 479 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 RASSF1Q9NS23 344 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 SLC25A37Q9NYZ2 338 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF629Q9UEG4 869 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 TAGLN3Q9UI15 199 aa12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 LEF1Q9UJU2 399 aaPredicted RBP12.55□□□□□ -0.4
PDLIM2-213ENST00000448520 C2orf92A0A1B0GVN3 265 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 LRRC3CA6NJW4 275 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 RFXANKO14593 260 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 TRIM3O75382 744 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 CBX7O95931 251 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 HOXB9P17482 250 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 DDX5P17844 614 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 S1PR1P21453 382 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 PRDX6P30041 224 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 CEACAM8P31997 349 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 TMED10P49755 219 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 GABPB1Q06547 395 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 NFYCQ13952 458 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 KRT72Q14CN4 511 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 MLC1Q15049 377 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 FBXL19-AS1Q494R0 122 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 MMEL1Q495T6 779 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 HLA-DQA1Q5Y7H0 255 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 DLEU7Q6UYE1 221 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF621Q6ZSS3 439 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 MSANTD1Q6ZTZ1 278 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 SZRD1Q7Z422 152 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 PACS2Q86VP3 889 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 ZZZ3Q8IYH5 903 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 SAMD14Q8IZD0 417 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 VWA5B2Q8N398 1253 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 GOT1L1Q8NHS2 421 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF675Q8TD23 568 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 FAM222BQ8WU58 562 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 DIO2Q92813 273 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 RNASE6Q93091 150 aaKnown RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 CTHRC1Q96CG8 243 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 ELP4Q96EB1 424 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms