RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 PTGDSP41222 190 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 MAGEA5P43359 124 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 TDGF1P3P51864 188 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 C17orf67Q0P5P2 114 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 FADDQ13158 208 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 NFYCQ13952 458 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 CYLC2Q14093 348 aaPredicted RBP11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 GNA13Q14344 377 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 SLC10A1Q14973 349 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 TOMM20Q15388 145 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 GRAMD1BQ3KR37 738 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 GTDC1Q4AE62 458 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 GPAT3Q53EU6 434 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 COQ5Q5HYK3 327 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 DHDDSQ86SQ9 333 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 DPP10Q8N608 796 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 TMEM251Q8N6I4 163 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 ROPN1LQ96C74 230 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 AURKBQ96GD4 344 aaPredicted RBP11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 LDAHQ9H6V9 325 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 ZNF703Q9H7S9 590 aaPredicted RBP11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 SLC6A13Q9NSD5 602 aa11.96□□□□□ -0.5
ERGIC3-209ENST00000447986 LRRC3CA6NJW4 275 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 ALG1L2C9J202 215 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 NDUFB5O43674 189 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 CBX6O95503 412 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 OXSR1O95747 527 aaPredicted RBP11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 ANGPTL1O95841 491 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 DSTNP60981 165 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 RNFT1Q5M7Z0 435 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 HEPHL1Q6MZM0 1159 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 MTDHQ86UE4 582 aaKnown RBP11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 PLCZ1Q86YW0 608 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 MISPQ8IVT2 679 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 SIAH3Q8IW03 269 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 PCYOX1LQ8NBM8 494 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 OR4C3Q8NH37 302 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 RP9Q8TA86 221 aaKnown RBP11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 RNF138Q8WVD3 245 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 OIT3Q8WWZ8 545 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 GNRHR2Q96P88 292 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 DEFB127Q9H1M4 99 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 EXO5Q9H790 373 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 PTGES2Q9H7Z7 377 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 ZDHHC11Q9H8X9 412 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 FBXO34Q9NWN3 711 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 CALML5Q9NZT1 146 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 ARMCX1Q9P291 453 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 P2RX2Q9UBL9 471 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 ADAM21Q9UKJ8 722 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 C15orf41Q9Y2V0 281 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 ARL2BPQ9Y2Y0 163 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 WDR45Q9Y484 360 aa11.95□□□□□ -0.5
ERGIC3-209ENST00000447986 LOC100653049A0A140TA62 436 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 A0A1W2PQD3 144 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 TRAPPC6AO75865 159 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 KRT34O76011 436 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 FAM107AO95990 144 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 NPPAP01160 153 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 GUSBP08236 651 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 NR2F1P10589 423 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 ENDOUP21128 410 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 GCKP35557 465 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 DCTP40126 519 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 ATP12AP54707 1039 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 RGNQ15493 299 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 GPR68Q15743 365 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.94□□□□□ -0.57e-8■■■■□ 21
ERGIC3-209ENST00000447986 CMPK2Q5EBM0 449 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 COX20Q5RI15 118 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 GKAP1Q5VSY0 366 aaPredicted RBP11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 ARHGAP11AQ6P4F7 1023 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 MTERF4Q7Z6M4 381 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 PIGWQ7Z7B1 504 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 MARCH3Q86UD3 253 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 SNX32Q86XE0 403 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 ZNF614Q8N883 585 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 OR4K17Q8NGC6 315 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 NTNG2Q96CW9 530 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 TRNT1Q96Q11 434 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 ZNF350Q9GZX5 532 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 ACKR4Q9NPB9 350 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 SLC25A37Q9NYZ2 338 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 FLRT3Q9NZU0 649 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 VAPAQ9P0L0 249 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 SLAMF8Q9P0V8 285 aa11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 SMG1Q96Q15 3661 aaKnown RBP11.94□□□□□ -0.5
ERGIC3-209ENST00000447986 DCTN3O75935 186 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 RFPL3SP0C7P2 107 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 ETFAP13804 333 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 CD1EP15812 388 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 HOXB9P17482 250 aaPredicted RBP11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 CRISP3P54108 245 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 GAS1P54826 345 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 FNDC7Q5VTL7 733 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 ZAR1Q86SH2 424 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 ZNF619Q8N2I2 560 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 WDSUB1Q8N9V3 476 aa11.93□□□□□ -0.5
ERGIC3-209ENST00000447986 DUSP19Q8WTR2 217 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms