RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 OR2M5A3KFT3 312 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 TUBAL3A6NHL2 446 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 EMC8O43402 210 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 TNFSF13O75888 250 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 LAMP1P11279 417 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 EPXP11678 715 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 ASMTP46597 345 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 PSMD4P55036 377 aaKnown RBP18.73■□□□□ 0.59
SDC1-205ENST00000447124 DUSP5Q16690 384 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 WDR93Q6P2C0 686 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 EMBQ6PCB8 327 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 LUZP2Q86TE4 346 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 CDC20BQ86Y33 519 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 KIF18BQ86Y91 864 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 GRAMD2AQ8IUY3 354 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 UBQLNLQ8IYU4 475 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 FBXO30Q8TB52 745 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 FIG4Q92562 907 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 SLC9A6Q92581 669 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 MTERF3Q96E29 417 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 PPP3R2Q96LZ3 170 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 YIPF4Q9BSR8 244 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 TMEM109Q9BVC6 243 aa18.73■□□□□ 0.59
SDC1-205ENST00000447124 RBM24Q9BX46 236 aaKnown RBP18.73■□□□□ 0.59
SDC1-205ENST00000447124 CLEC4MQ9H2X3 399 aaPredicted RBP18.73■□□□□ 0.59
SDC1-205ENST00000447124 HRNRQ86YZ3 2850 aaPredicted RBP18.72■□□□□ 0.59
SDC1-205ENST00000447124 SHISA8B8ZZ34 492 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 KCNK2O95069 426 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 KCNH1O95259 989 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 CLK3P49761 638 aaKnown RBP18.72■□□□□ 0.59
SDC1-205ENST00000447124 ART1P52961 327 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 C17orf67Q0P5P2 114 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 TMEM44Q2T9K0 475 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 C6orf136Q5SQH8 315 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 RAET1LQ5VY80 246 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 MFSD12Q6NUT3 480 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 FIGNL1Q6PIW4 674 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 HOMEZQ8IX15 550 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 FAM120BQ96EK7 910 aaKnown RBP18.72■□□□□ 0.59
SDC1-205ENST00000447124 OTUB1Q96FW1 271 aaPredicted RBP18.72■□□□□ 0.59
SDC1-205ENST00000447124 TBL1XR1Q9BZK7 514 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 PTGES2Q9H7Z7 377 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 ZNF395Q9H8N7 513 aaPredicted RBP18.72■□□□□ 0.59
SDC1-205ENST00000447124 ITPR3Q14573 2671 aa18.72■□□□□ 0.59
SDC1-205ENST00000447124 MTORP42345 2549 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 A0A1W2PNV4 684 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 A8MXE2 369 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 ALG1L2C9J202 215 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 SCAMP2O15127 329 aaKnown RBP18.71■□□□□ 0.59
SDC1-205ENST00000447124 GMFGO60234 142 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 OXSR1O95747 527 aaPredicted RBP18.71■□□□□ 0.59
SDC1-205ENST00000447124 CLDN20P56880 219 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 SORDQ00796 357 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 GANABQ14697 944 aaKnown RBP18.71■□□□□ 0.59
SDC1-205ENST00000447124 PTGR1Q14914 329 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 MLC1Q15049 377 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 GLYR1Q49A26 553 aaPredicted RBP18.71■□□□□ 0.59
SDC1-205ENST00000447124 VPS26BQ4G0F5 336 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 IL23RQ5VWK5 629 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 LRIG3Q6UXM1 1119 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 R3HCC1LQ7Z5L2 792 aaKnown RBP18.71■□□□□ 0.59
SDC1-205ENST00000447124 STARD4Q96DR4 205 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 NPAS1Q99742 590 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 KLHDC3Q9BQ90 382 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 C1orf50Q9BV19 199 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 CCM2LQ9NUG4 571 aaPredicted RBP18.71■□□□□ 0.59
SDC1-205ENST00000447124 GALNT8Q9NY28 637 aa18.71■□□□□ 0.59
SDC1-205ENST00000447124 MAP1AP78559 2803 aaPredicted RBP18.71■□□□□ 0.59
SDC1-205ENST00000447124 A0A1W2PRB8 838 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 ITM2AO43736 263 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 TNFRSF21O75509 655 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 TBXA2RP21731 343 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 SERPINB5P36952 375 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 DIO3P55073 304 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.7■□□□□ 0.58
SDC1-205ENST00000447124 CCNJQ5T5M9 372 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 ZCCHC12Q6PEW1 402 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 CHMP1BQ7LBR1 199 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 SZRD1Q7Z422 152 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 MEIOBQ8N635 442 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 KRTCAP2Q8N6L1 136 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 GATSQ8NAP1 163 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 GOT1L1Q8NHS2 421 aaPredicted RBP18.7■□□□□ 0.58
SDC1-205ENST00000447124 COQ8BQ96D53 544 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 ZNF845Q96IR2 970 aaPredicted RBP18.7■□□□□ 0.58
SDC1-205ENST00000447124 MS4A4EQ96PG1 132 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 PIGMQ9H3S5 423 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 ST6GALNAC2Q9UJ37 374 aa18.7■□□□□ 0.58
SDC1-205ENST00000447124 SLC22A20A6NK97 555 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 TMEM114B3SHH9 223 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 H3BML4 177 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 LINC01387J3KSC0 135 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 SEC14L5O43304 696 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 SKAP2O75563 359 aaPredicted RBP18.69■□□□□ 0.58
SDC1-205ENST00000447124 LYPLA1O75608 230 aaPredicted RBP18.69■□□□□ 0.58
SDC1-205ENST00000447124 NGFRP08138 427 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 ALOX5P09917 674 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 KIR2DL2P43627 348 aaPredicted RBP18.69■□□□□ 0.58
SDC1-205ENST00000447124 VWA1Q6PCB0 445 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 P4HA3Q7Z4N8 544 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms