RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 PRR14Q9BWN1 585 aa12.35□□□□□ -0.43
LINC00642-202ENST00000442515 NPAP1Q9NZP6 1156 aa12.35□□□□□ -0.43
LINC00642-202ENST00000442515 STOML1Q9UBI4 398 aa12.35□□□□□ -0.43
LINC00642-202ENST00000442515 PSME2Q9UL46 239 aa12.35□□□□□ -0.43
LINC00642-202ENST00000442515 ZNF780BQ9Y6R6 833 aa12.35□□□□□ -0.43
LINC00642-202ENST00000442515 E7EQL1 145 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 PGRMC1O00264 195 aaKnown RBP12.34□□□□□ -0.43
LINC00642-202ENST00000442515 LY6HO94772 140 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 CDC25BP30305 580 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 ALDH9A1P49189 494 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 ITGADQ13349 1161 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 GTF2H2Q13888 395 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 PPA1Q15181 289 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 TMEM201Q5SNT2 666 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 GTF2H2CQ6P1K8 395 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 BHLHA15Q7RTS1 189 aaPredicted RBP12.34□□□□□ -0.43
LINC00642-202ENST00000442515 COMMD6Q7Z4G1 85 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 GOLGA7Q7Z5G4 137 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 MARCH3Q86UD3 253 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 TDRPQ86YL5 185 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 METTL4Q8N3J2 472 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 CEP112Q8N8E3 955 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 TRPC4APQ8TEL6 797 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 TM4SF18Q96CE8 201 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 CDK15Q96Q40 435 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 DHRS9Q9BPW9 319 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
LINC00642-202ENST00000442515 TMEM185BQ9H7F4 350 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 IPPKQ9H8X2 491 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 PFDN4Q9NQP4 134 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 FAM120CQ9NX05 1096 aaKnown RBP12.34□□□□□ -0.43
LINC00642-202ENST00000442515 AHSPQ9NZD4 102 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 UTS2RQ9UKP6 389 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 ACOT9Q9Y305 439 aa12.34□□□□□ -0.43
LINC00642-202ENST00000442515 IGLV3-32A0A0A0MS00 114 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 GOLGA8QA0A0J9YX86 632 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 GOLGA8OA6NCC3 632 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 CXorf49A8MYA2 514 aaPredicted RBP12.33□□□□□ -0.44
LINC00642-202ENST00000442515 GOLGA8NF8WBI6 632 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 GOLGA8RI6L899 631 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 COL6A2P12110 1019 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 APEHP13798 732 aaKnown RBP12.33□□□□□ -0.44
LINC00642-202ENST00000442515 EFNA4P52798 201 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 ARL4CP56559 192 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 PSG6Q00889 435 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 ZNF155Q12901 538 aaPredicted RBP12.33□□□□□ -0.44
LINC00642-202ENST00000442515 SH2D4BQ5SQS7 431 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 FRG2Q64ET8 278 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 HBMQ6B0K9 141 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 GTF2IRD2BQ6EKJ0 949 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 B3GLCTQ6Y288 498 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 ESPNLQ6ZVH7 1005 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 GTF2IRD2Q86UP8 949 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 TUSC5Q8IXB3 177 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 CCDC116Q8IYX3 515 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 FBXL14Q8N1E6 418 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 RNF128Q8TEB7 428 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 C3orf49Q96BT1 292 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 RADILQ96JH8 1075 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 FRG2BQ96QU4 278 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 RBBP8Q99708 897 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 NPAS1Q99742 590 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 NMRAL1Q9HBL8 299 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 TXNDC16Q9P2K2 825 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 KLHL13Q9P2N7 655 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 POU2F3Q9UKI9 436 aa12.33□□□□□ -0.44
LINC00642-202ENST00000442515 IGHV4-61A0A0C4DH41 118 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 A0A0J9YW62 118 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 GOLGA6L10A0A0M3HER8 536 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 VWC2LB2RUY7 222 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 ZNF814B7Z6K7 855 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 LYZL6O75951 148 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 CLDN9O95484 217 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 TGFAP01135 160 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 GFAPP14136 432 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 ARL1P40616 181 aaPredicted RBP12.32□□□□□ -0.44
LINC00642-202ENST00000442515 NR4A2P43354 598 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 CLK3P49761 638 aaKnown RBP12.32□□□□□ -0.44
LINC00642-202ENST00000442515 RAC1P63000 192 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 GALNT1Q10472 559 aaPredicted RBP12.32□□□□□ -0.44
LINC00642-202ENST00000442515 PDIA2Q13087 525 aaKnown RBP12.32□□□□□ -0.44
LINC00642-202ENST00000442515 ZNF239Q16600 458 aaKnown RBP12.32□□□□□ -0.44
LINC00642-202ENST00000442515 PFKFB4Q16877 469 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 PDLIM3Q53GG5 364 aaPredicted RBP12.32□□□□□ -0.44
LINC00642-202ENST00000442515 ZNF662Q6ZS27 426 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 CMC1Q7Z7K0 106 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 GTPBP8Q8N3Z3 284 aaPredicted RBP12.32□□□□□ -0.44
LINC00642-202ENST00000442515 MTBPQ96DY7 904 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 PBKQ96KB5 322 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 CPNE1Q99829 537 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 FAIM2Q9BWQ8 316 aa12.32□□□□□ -0.44
LINC00642-202ENST00000442515 YLPM1P49750 1951 aaKnown RBP12.31□□□□□ -0.44
LINC00642-202ENST00000442515 ESYT3A0FGR9 886 aa12.31□□□□□ -0.44
LINC00642-202ENST00000442515 SYCE1LA8MT33 242 aa12.31□□□□□ -0.44
LINC00642-202ENST00000442515 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
LINC00642-202ENST00000442515 ANGPTL1O95841 491 aa12.31□□□□□ -0.44
LINC00642-202ENST00000442515 LTA4HP09960 611 aaKnown RBP12.31□□□□□ -0.44
LINC00642-202ENST00000442515 PABPC4LP0CB38 370 aaKnown RBP12.31□□□□□ -0.44
LINC00642-202ENST00000442515 PSMA4P25789 261 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms