RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SLC43A2Q8N370 569 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 TMEM105Q8N8V8 129 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ZNF420Q8TAQ5 688 aaPredicted RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 DOK4Q8TEW6 326 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 DIO2Q92813 273 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 SENP5Q96HI0 755 aaPredicted RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 VSTM2LQ96N03 204 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 STRADBQ9C0K7 418 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 LANCL2Q9NS86 450 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 CHCHD3Q9NX63 227 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 PTTG2Q9NZH5 202 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 WARS2Q9UGM6 360 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 ATXN7L1Q9ULK2 861 aaPredicted RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 MED31Q9Y3C7 131 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 FRG2CA6NGY1 282 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ZAR1LA6NP61 321 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 A8MUA0 341 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 GTPBP1O00178 669 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 MED26O95402 600 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 GASTP01350 101 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 KLK3P07288 261 aaPredicted RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 ITIH1P19827 911 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 DRD5P21918 477 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 FMO3P31513 532 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 MPLP40238 635 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 GPR143P51810 404 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 IL11RAQ14626 422 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 NPTX1Q15818 432 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 NKAIN1Q4KMZ8 207 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 C1orf94Q6P1W5 598 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 KLHL17Q6TDP4 642 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 RASSF6Q6ZTQ3 369 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 MBOAT2Q6ZWT7 520 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 OLIG3Q7RTU3 272 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 RBM45Q8IUH3 476 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 CLVS1Q8IUQ0 354 aaPredicted RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 GRAMD2AQ8IUY3 354 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 LACC1Q8IV20 430 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ALDH16A1Q8IZ83 802 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 OR8J1Q8NGP2 316 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 HSPBAP1Q96EW2 488 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 LCORQ96JN0 433 aaPredicted RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 OR6C1Q96RD1 312 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 NIPSNAP1Q9BPW8 284 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 ITPAQ9BY32 194 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 TGIF2Q9GZN2 237 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 QRSL1Q9H0R6 528 aaKnown RBP5.59□□□□□ -1.51
VPS50-205ENST00000441602 RASSF1Q9NS23 344 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 TBC1D23Q9NUY8 699 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 MKL2Q9ULH7 1088 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 RNF6Q9Y252 685 aa5.59□□□□□ -1.51
VPS50-205ENST00000441602 TCRBV16S1A1N1A0A5B0 115 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 FFAR1O14842 300 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CPNE3O75131 537 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 REM1O75628 298 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 PPM1BO75688 479 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 RCBTB2O95199 551 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CSTAP01040 98 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CTSBP07858 339 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 MYF5P13349 255 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 S1PR1P21453 382 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 FPR3P25089 353 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 POLR2IP36954 125 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 RBM34P42696 430 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 SLC6A8P48029 635 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 GSSP48637 474 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 ST13P50502 369 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 EMP2P54851 167 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 NRG3P56975 720 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CFHR1Q03591 330 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 PRSS48Q7RTY5 328 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 GDF7Q7Z4P5 450 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 BMP8AQ7Z5Y6 402 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 B3GNT8Q7Z7M8 397 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CLIP4Q8N3C7 705 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 OR4D11Q8NGI4 311 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 C16orf52Q8NHV5 167 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 RHOXF1Q8NHV9 184 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 WDR36Q8NI36 951 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 CNIH3Q8TBE1 160 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SLC7A13Q8TCU3 470 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CRELD1Q96HD1 420 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 GAL3ST4Q96RP7 486 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 BCL7BQ9BQE9 202 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 COPS4Q9BT78 406 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SLC25A19Q9HC21 320 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CTPS2Q9NRF8 586 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 UBQLN4Q9NRR5 601 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CNOT2Q9NZN8 540 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 GPR55Q9Y2T6 319 aaPredicted RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 RPL36Q9Y3U8 105 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 PCDHGB5Q9Y5G0 923 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 PCDHGA6Q9Y5G7 932 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 GON4LQ3T8J9 2241 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SCN3AQ9NY46 2000 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 IGKV3D-11A0A0A0MRZ8 115 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 IGHV5-10-1A0A0J9YXX1 117 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 C2orf92A0A1B0GVN3 265 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CDHR4A6H8M9 788 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SERINC4A6NH21 518 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms