RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 UFSP2Q9NUQ7 469 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 SOCS6O14544 535 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 INPPL1O15357 1258 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 PRODHO43272 600 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 HYAL3O43820 417 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 LY86O95711 162 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 RB1P06400 928 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ACP2P11117 423 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ANKRD39Q53RE8 183 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 RSPO2Q6UXX9 243 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 SSX9Q7RTT3 188 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ARL14EPQ8N8R7 260 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 GPR32P1Q8NGA4 272 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 AHCYL2Q96HN2 611 aaKnown RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 PFDN5Q99471 154 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 BHLHE41Q9C0J9 482 aaPredicted RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 RNF32Q9H0A6 362 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 NT5DC2Q9H857 520 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ADARB2Q9NS39 739 aaKnown RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 PHF11Q9UIL8 331 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 GPR171O14626 319 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CHST10O43529 356 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ATG12O94817 140 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CD160O95971 181 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CBSLP0DN79 551 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CBSP35520 551 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 SLC6A12P48065 614 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 LIMK1P53667 647 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 HYAL4Q2M3T9 481 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 GPR139Q6DWJ6 353 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 FAAP20Q6NZ36 180 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 TMEM91Q6ZNR0 172 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CPOQ8IVL8 374 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 OR8D4Q8NGM9 314 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 ARSGQ96EG1 525 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 GPR137Q96N19 417 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 TRMT61BQ9BVS5 477 aaKnown RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 B4GALT6Q9UBX8 382 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 EXOSC1Q9Y3B2 195 aaKnown RBP10.99□□□□□ -0.65
SMPD4-209ENST00000439886 CHST2Q9Y4C5 530 aa10.99□□□□□ -0.65
SMPD4-209ENST00000439886 hCG_1807616A0A1W2PRN6 198 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 WRBO00258 174 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 FZD7O75084 574 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 SPDEFO95238 335 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 WDPCPO95876 746 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 LGI1O95970 557 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 LIMS3P0CW19 117 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 LIMS4P0CW20 117 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 C8orf89P0DMQ9 161 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 VEGFCP49767 419 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 SELENOPP49908 381 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 PSMA6P60900 246 aaKnown RBP10.98□□□□□ -0.65
SMPD4-209ENST00000439886 PLBD1Q6P4A8 553 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-209ENST00000439886 FBXO15Q8NCQ5 510 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-209ENST00000439886 ADAMTS19Q8TE59 1207 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 PXYLP1Q8TE99 480 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 ING5Q8WYH8 240 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 GPA33Q99795 319 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 FAIM2Q9BWQ8 316 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 PRDM9Q9NQV7 894 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 TDP1Q9NUW8 608 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 ALPK2Q86TB3 2170 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 OR6C74A6NCV1 312 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 SLC9B1P1A6NJY1 282 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 H3BNC9 293 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 PDCD5O14737 125 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 ARPC1BO15143 372 aaKnown RBP10.98□□□□□ -0.65
SMPD4-209ENST00000439886 ADAM12O43184 909 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 SNAPINO95295 136 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 HPXP02790 462 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 CLTBP09497 229 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 UCHL1P09936 223 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 FURINP09958 794 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 AHCYP23526 432 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 SLC6A1P30531 599 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 CTSOP43234 321 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-209ENST00000439886 LASP1Q14847 261 aaKnown RBP10.98□□□□□ -0.65
SMPD4-209ENST00000439886 GGTA1PQ4G0N0 100 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 KLHL26Q53HC5 615 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 TMEM220Q6QAJ8 160 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 RPTNQ6XPR3 784 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 GPAT4Q86UL3 456 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 ZNF687Q8N1G0 1237 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 KCT2Q8NC54 265 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 OR6T1Q8NGN1 323 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 WDR20Q8TBZ3 569 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 DOK4Q8TEW6 326 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 KLHL15Q96M94 604 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 F2RL3Q96RI0 385 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 BBS4Q96RK4 519 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 EMC7Q9NPA0 242 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 TEX10Q9NXF1 929 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-209ENST00000439886 MIOXQ9UGB7 285 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 GREB1Q4ZG55 1949 aa10.98□□□□□ -0.65
SMPD4-209ENST00000439886 DOCK4Q8N1I0 1966 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 METTL21EPA6NDL7 271 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 MAGEB4O15481 346 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-209ENST00000439886 FMO6PO60774 539 aa10.97□□□□□ -0.65
SMPD4-209ENST00000439886 POP7O75817 140 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms