RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RADILQ96JH8 1075 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 LINC00052Q96N35 136 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 RBCK1Q9BYM8 510 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 PRMT8Q9NR22 394 aaPredicted RBP8.02□□□□□ -1.12
HPS4-206ENST00000439453 DLL4Q9NR61 685 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 GPR52Q9Y2T5 361 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 SIT1Q9Y3P8 196 aa8.02□□□□□ -1.12
HPS4-206ENST00000439453 IGLV3-16A0A075B6K0 115 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 hCG_1807616A0A1W2PRN6 198 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 MAN2B1O00754 1011 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 GPR171O14626 319 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 EIF4EP06730 217 aaKnown RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 SLC1A3P43003 542 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 SRP9P49458 86 aaKnown RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 SMSP52788 366 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 RAB8AP61006 207 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 PIN1Q13526 163 aaPredicted RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 KIAA1211LQ6NV74 962 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 CRTC1Q6UUV9 634 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 CD300LDQ6UXZ3 194 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 ZER1Q7Z7L7 766 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 LRRC28Q86X40 367 aaPredicted RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 HORMAD2Q8N7B1 307 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 WDR48Q8TAF3 677 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 WBP1Q96G27 269 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 TMEM19Q96HH6 336 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 MS4A3Q96HJ5 214 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 OSGEPL1Q9H4B0 414 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 ACAD8Q9UKU7 415 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 TP53BP1Q12888 1972 aaPredicted RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 A0A1B0GVC2 190 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 A6NIN4 97 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 ARHGEF33A8MVX0 844 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 NEDD8-MDP1E9PL57 170 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 SAP18O00422 153 aaKnown RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 TBL1XO60907 577 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 UQCRC2P22695 453 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 RPL3P39023 403 aaKnown RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 RFX3P48380 749 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 PITPNBP48739 271 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 VSX2P58304 361 aaPredicted RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 TAS2R50P59544 299 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 ZNF155Q12901 538 aaPredicted RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 UBXN2BQ14CS0 331 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 NDUFA9Q16795 377 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 FAM71E1Q6IPT2 247 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 IL20RBQ6UXL0 311 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 ZNF783Q6ZMS7 281 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 BMPERQ8N8U9 685 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 FBXW5Q969U6 566 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 SHDQ96IW2 340 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 GPA33Q99795 319 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 SLC7A5P2Q9GIP4 190 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 SCP2D1Q9UJQ7 156 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 LSM7Q9UK45 103 aaKnown RBP8.02□□□□□ -1.13
HPS4-206ENST00000439453 CFAP54Q96N23 3096 aa8.02□□□□□ -1.13
HPS4-206ENST00000439453 TUBAL3A6NHL2 446 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 K7ESF4 209 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 M0R233 179 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 CASC3O15234 703 aaKnown RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 ADH1CP00326 375 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 SULT1A3P0DMM9 295 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 SULT1A4P0DMN0 295 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 RBMS1P29558 406 aaKnown RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 CSKP41240 450 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 RIPPLY1Q0D2K3 151 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 ZMYND11Q15326 602 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 MED27Q6P2C8 311 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 MAMSTRQ6ZN01 415 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 PRICKLE2Q7Z3G6 844 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 IQCHQ86VS3 1027 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 NR2C2APQ86WQ0 139 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 OR4K5Q8NGD3 323 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 OR10Z1Q8NGY1 313 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 ZNF354BQ96LW1 612 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 COQ10AQ96MF6 247 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 C1QTNF6Q9BXI9 259 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 CXorf36Q9H7Y0 433 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 A4GALTQ9NPC4 353 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 MYNNQ9NPC7 610 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 ASB6Q9NWX5 421 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 STOX2Q9P2F5 926 aaPredicted RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 FAM8A1Q9UBU6 413 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 KIF25Q9UIL4 384 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 CBLCQ9ULV8 474 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 A4GNTQ9UNA3 340 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 SLC27A6Q9Y2P4 619 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 KCNMB2Q9Y691 235 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 DVL2O14641 736 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 HRGP04196 525 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 ATP1B2P14415 290 aaPredicted RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 KCNJ5P48544 419 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 LSM11P83369 360 aaKnown RBP eCLIP8.01□□□□□ -1.13
HPS4-206ENST00000439453 RPL6Q02878 288 aaKnown RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 ST3GAL2Q16842 350 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 NDUFAF5Q5TEU4 345 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 LYPD4Q6UWN0 246 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 RASGRP3Q8IV61 690 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 DTWD2Q8NBA8 298 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms