RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 ACP2P11117 423 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF19P17023 458 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 CCR7P32248 378 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 PREPP48147 710 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 CSNK1DP48730 415 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 CRYBA2P53672 197 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 LIM2P55344 173 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 OR10A3P58181 314 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 MC2RQ01718 297 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 ZNF385BQ569K4 471 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 C3orf38Q5JPI3 329 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 PGBD2Q6P3X8 592 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 TMEM88Q6PEY1 159 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 C19orf48Q6RUI8 117 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 AGTRAPQ6RW13 159 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 LAS2Q8IYD9 372 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 MRPL43Q8N983 215 aaKnown RBP6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 SLC7A13Q8TCU3 470 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 ADAMTS14Q8WXS8 1223 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 FOXJ1Q92949 421 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 UBE2E3Q969T4 207 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 LRRC46Q96FV0 321 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 FCRL1Q96LA6 429 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 IFT27Q9BW83 186 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 SLC25A19Q9HC21 320 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 CYB5R1Q9UHQ9 305 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 MSRAQ9UJ68 235 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 PRELID3BQ9Y3B1 194 aa6.96□□□□□ -1.29
SYNPO2-203ENST00000434046 A0A0G2JN53 185 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 RPS10-NUDT3A0A1W2PQS6 291 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 RGS9O75916 674 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 SNRPBP14678 240 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 POU3F2P20265 443 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 PVALBP20472 110 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 VIPR2P41587 438 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 PITPNAQ00169 270 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 RAB40BQ12829 278 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 HTR4Q13639 388 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 SLBPQ14493 270 aaKnown RBP eCLIP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 DHCR24Q15392 516 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF805Q5CZA5 627 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 SHEQ5VZ18 495 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 FBXO15Q8NCQ5 510 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 CHFRQ96EP1 664 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 PELOQ9BRX2 385 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 ZBP1Q9H171 429 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC6A17Q9H1V8 727 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 MVB12BQ9H7P6 319 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 CUEDC1Q9NWM3 386 aaPredicted RBP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 RPS6KB2Q9UBS0 482 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 FBXW2Q9UKT8 454 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 RCE1Q9Y256 329 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 CCL26Q9Y258 94 aa6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 TDRD15B5MCY1 1934 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-203ENST00000434046 A0A0B4J203 849 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PRAMEF25A6NGN4 478 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC9B1P1A6NJY1 282 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PRSS44E7EML9 344 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 KHNYNO15037 678 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 FRS3O43559 492 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SCN2BO60939 215 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 GCM2O75603 506 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ETHE1O95571 254 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 APODP05090 189 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PCCBP05166 539 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 GLAP06280 429 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 IL3P08700 152 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 HNRNPA1P09651 372 aaKnown RBP eCLIP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 NFYAP23511 347 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PTGER1P34995 402 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 MAPK9P45984 424 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CAPZA2P47755 286 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SELENOPP49908 381 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM115Q12893 351 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 EIF4EBP2Q13542 120 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CAMK2DQ13557 499 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 TPBGQ13641 420 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ATXN7L3Q14CW9 347 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 NDUFAF6Q330K2 333 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CCDC157Q569K6 752 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 C18orf63Q68DL7 685 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ALG1LQ6GMV1 187 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 COMMD6Q7Z4G1 85 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 VRK3Q8IV63 474 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SERPINA12Q8IW75 414 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CBARPQ8N350 705 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 FAM181AQ8N9Y4 354 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 RELL2Q8NC24 303 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 OR5M3Q8NGP4 307 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 BBS10Q8TAM1 723 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CHTF18Q8WVB6 975 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 GCDHQ92947 438 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 NUS1Q96E22 293 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 MED18Q9BUE0 208 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PRR14Q9BWN1 585 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 WDR26Q9H7D7 661 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 DDX31Q9H8H2 851 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 RDH14Q9HBH5 336 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 WBP1LQ9NX94 342 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms