RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 HMGA2P52926 109 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ILF3Q12906 894 aaKnown RBP eCLIP7.81□□□□□ -1.16
CD44-208ENST00000428726 ENTPD8Q5MY95 495 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 CCBE1Q6UXH8 406 aaPredicted RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 RPTNQ6XPR3 784 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 USP30Q70CQ3 517 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ASPGQ86U10 573 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 GLCCI1Q86VQ1 547 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 NRROSQ86YC3 692 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 LYSMD2Q8IV50 215 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 DEPDC4Q8N2C3 294 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 PARP16Q8N5Y8 322 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 OR52P1PQ8NH57 321 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 FCGR1BQ92637 280 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 PIGKQ92643 395 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 SAMD8Q96LT4 415 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 WDR92Q96MX6 357 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 OR2A14Q96R47 310 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ZNF607Q96SK3 696 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 MAP3K3Q99759 626 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ITPAQ9BY32 194 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 MMP28Q9H239 520 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 FN3KQ9H479 309 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 NEUROD4Q9HD90 331 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 PLSCR3Q9NRY6 295 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 PLCXD1Q9NUJ7 323 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 CPNE7Q9UBL6 633 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 DHCR7Q9UBM7 475 aaKnown RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 ENOPH1Q9UHY7 261 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 WDR45Q9Y484 360 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 FANCMQ8IYD8 2048 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 KHNYNO15037 678 aaKnown RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 PROM1O43490 865 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 CCNKO75909 580 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 OPN1LWP04000 364 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 THY1P04216 161 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 SAGP10523 405 aaPredicted RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 MPIP34949 423 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 TEKQ02763 1124 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ZNF404Q494X3 552 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 IL20RBQ6UXL0 311 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 AKAP14Q86UN6 197 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 OR51G2Q8NGK0 314 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 LMX1AQ8TE12 382 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 MYDGFQ969H8 173 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 SPACA7Q96KW9 195 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 CEP19Q96LK0 163 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 SIGLEC11Q96RL6 698 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 PSD2Q9BQI7 771 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 FAIM2Q9BWQ8 316 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 HCAR1Q9BXC0 346 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 WDR12Q9GZL7 423 aaKnown RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 SLC38A1Q9H2H9 487 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 DDX31Q9H8H2 851 aaKnown RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 CLN6Q9NWW5 311 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ADAM29Q9UKF5 820 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 SLC17A4Q9Y2C5 497 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 UGT2A1Q9Y4X1 527 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 RIF1Q5UIP0 2472 aaKnown RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 CD8B2A6NJW9 211 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 DSCR3O14972 297 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 GDF9O60383 454 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 OR10H2O60403 315 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 LALBAP00709 142 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 CDK1P06493 297 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 HBQ1P09105 142 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 CD8BP10966 210 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 F3P13726 295 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 TEAD1P28347 426 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 EIF2DP41214 584 aaKnown RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 MRPS15P82914 257 aaKnown RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 HHEXQ03014 270 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ZNF91Q05481 1191 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 GAS6Q14393 721 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ZNF267Q14586 743 aaPredicted RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 FCRL6Q6DN72 434 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 SLC48A1Q6P1K1 146 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 LRRC17Q8N6Y2 441 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ZNF321PQ8N8H1 164 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 DENND6BQ8NEG7 585 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 OR2L8Q8NGY9 312 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 PMEPA1Q969W9 287 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 EFHD2Q96C19 240 aaPredicted RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 PPP1R14BQ96C90 147 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 ZNF764Q96H86 408 aaPredicted RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 ZNF354BQ96LW1 612 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 BTBD2Q9BX70 525 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 TRIM45Q9H8W5 580 aaPredicted RBP7.81□□□□□ -1.16
CD44-208ENST00000428726 A4GALTQ9NPC4 353 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 PRDM6Q9NQX0 595 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 MAN2C1Q9NTJ4 1040 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 COLEC10Q9Y6Z7 277 aa7.81□□□□□ -1.16
CD44-208ENST00000428726 CEP250Q9BV73 2442 aa7.8□□□□□ -1.16
CD44-208ENST00000428726 ALPK3Q96L96 1907 aa7.8□□□□□ -1.16
CD44-208ENST00000428726 HEATR5AQ86XA9 2040 aa7.8□□□□□ -1.16
CD44-208ENST00000428726 BDP1A6H8Y1 2624 aa7.8□□□□□ -1.16
CD44-208ENST00000428726 LOC110117498-PIK3R3F6TDL0 507 aa7.8□□□□□ -1.16
CD44-208ENST00000428726 PDE9AO76083 593 aa7.8□□□□□ -1.16
CD44-208ENST00000428726 HNRNPA2B1P22626 353 aaKnown RBP7.8□□□□□ -1.16
CD44-208ENST00000428726 S100A5P33763 92 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms