RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PAIP1Q9H074 479 aaKnown RBP14.38□□□□□ -0.11
BRAT1-202ENST00000421712 TPT1P8Q9HAU6 139 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 QPCTLQ9NXS2 382 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 LEF1Q9UJU2 399 aaPredicted RBP14.38□□□□□ -0.11
BRAT1-202ENST00000421712 NDUFAF1Q9Y375 327 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 PCDHB14Q9Y5E9 798 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 LIPGQ9Y5X9 500 aa14.38□□□□□ -0.11
BRAT1-202ENST00000421712 A0A096LPI6 279 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 NPIPA2E9PIF3 369 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 NPIPA3F8WFD2 350 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 CLIC1O00299 241 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 SLC19A2O60779 497 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 STX11O75558 287 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 ANGPTL1O95841 491 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 FREM3P0C091 2139 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 CD1EP15812 388 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 TCEA1P23193 301 aaKnown RBP14.37□□□□□ -0.11
BRAT1-202ENST00000421712 PTPN6P29350 595 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 DCTP40126 519 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 GAS1P54826 345 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 TXNL4AP83876 142 aaKnown RBP14.37□□□□□ -0.11
BRAT1-202ENST00000421712 HPCAP84074 193 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 C17orf67Q0P5P2 114 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 GTF3C1Q12789 2109 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 UBAP2LQ14157 1087 aaKnown RBP14.37□□□□□ -0.11
BRAT1-202ENST00000421712 COX20Q5RI15 118 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.37□□□□□ -0.11
BRAT1-202ENST00000421712 TRILQ7L0X0 811 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 CHDHQ8NE62 594 aaPredicted RBP14.37□□□□□ -0.11
BRAT1-202ENST00000421712 OR14L1PQ8NHC6 308 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 ROPN1LQ96C74 230 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 AURKBQ96GD4 344 aaPredicted RBP14.37□□□□□ -0.11
BRAT1-202ENST00000421712 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 SLC6A15Q9H2J7 730 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 DSN1Q9H410 356 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 SAR1AQ9NR31 198 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 MED11Q9P086 117 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.37□□□□□ -0.11
BRAT1-202ENST00000421712 DKKL1Q9UK85 242 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 FBXL2Q9UKC9 423 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 DNAJC13O75165 2243 aa14.37□□□□□ -0.11
BRAT1-202ENST00000421712 ZNF407Q9C0G0 2248 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 ALG1L2C9J202 215 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 H3BNH8 94 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 HMGN4O00479 90 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 PRRG2O14669 202 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 TPOP07202 933 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 NR2F1P10589 423 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 GCKP35557 465 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 ATP12AP54707 1039 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 KLF10Q13118 480 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.36□□□□□ -0.11
BRAT1-202ENST00000421712 MMEL1Q495T6 779 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 C1QL3Q5VWW1 255 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 APOOLQ6UXV4 268 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 OLIG3Q7RTU3 272 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 YRDCQ86U90 279 aaKnown RBP14.36□□□□□ -0.11
BRAT1-202ENST00000421712 PHOSPHO1Q8TCT1 267 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 RNF138Q8WVD3 245 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 NTNG2Q96CW9 530 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 RTN4RQ9BZR6 473 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 RAD21L1Q9H4I0 556 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 PTGES2Q9H7Z7 377 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 ACKR4Q9NPB9 350 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 SLC52A3Q9NQ40 469 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 SLAMF8Q9P0V8 285 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 ACAD8Q9UKU7 415 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 MKLN1Q9UL63 735 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 LIPT1Q9Y234 373 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 WDR45Q9Y484 360 aa14.36□□□□□ -0.11
BRAT1-202ENST00000421712 NCKAP5O14513 1909 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 C15orf38-AP3S2A0A0A6YYH1 394 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 TMEM247A6NEH6 219 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 C17orf51A8MQB3 221 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 GTPBP1O00178 669 aaKnown RBP14.35□□□□□ -0.11
BRAT1-202ENST00000421712 SUSD5O60279 629 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 FCMRO60667 390 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 HCN1O60741 890 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 CCDC22O60826 627 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 AGFG2O95081 481 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 IGHG3P01860 377 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 NGFRP08138 427 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 ETFAP13804 333 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 DRD4P21917 467 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 RNF144AP50876 292 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-202ENST00000421712 MAPRE2Q15555 327 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 EIPR1Q53HC9 387 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 WIPI1Q5MNZ9 446 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-202ENST00000421712 HEPHL1Q6MZM0 1159 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 FAM83FQ8NEG4 500 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-202ENST00000421712 OR2M3Q8NG83 312 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 NEIL3Q8TAT5 605 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 TSPEARQ8WU66 669 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 SARAFQ96BY9 339 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 SH3YL1Q96HL8 342 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-202ENST00000421712 NMUR2Q9GZQ4 415 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 UBQLN3Q9H347 655 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 HHATLQ9HCP6 504 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 ALKBH4Q9NXW9 302 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 TAS2R10Q9NYW0 307 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms