RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 A0A087WV62 115 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 A0A0J9YW62 118 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 CXCL13O43927 109 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 PCDH7O60245 1069 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 GPRIN2O60269 458 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 FCGR2AP12318 317 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 HSD3B1P14060 373 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 HSD3B2P26439 372 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 MPIP34949 423 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 CDKN1AP38936 164 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 HTR6P50406 440 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 PRR5P85299 388 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 CAV1Q03135 178 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 C2orf54Q08AI8 447 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 TSC22D1Q15714 1073 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 ETFDHQ16134 617 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 UAP1Q16222 522 aaPredicted RBP12.69□□□□□ -0.38
NFE4-201ENST00000420058 PGGHGQ32M88 737 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 UNC50Q53HI1 259 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 SH2D4BQ5SQS7 431 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 GALNT18Q6P9A2 607 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 BEND4Q6ZU67 534 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 GALNT10Q86SR1 603 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 SAMD14Q8IZD0 417 aaPredicted RBP12.69□□□□□ -0.38
NFE4-201ENST00000420058 FAM9CQ8IZT9 166 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 GABRG1Q8N1C3 465 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 CDYL2Q8N8U2 506 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 SMAP2Q8WU79 429 aaPredicted RBP12.69□□□□□ -0.38
NFE4-201ENST00000420058 S100PBPQ96BU1 408 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 LIPT1Q9Y234 373 aa12.69□□□□□ -0.38
NFE4-201ENST00000420058 GXYLT2A0PJZ3 443 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 A8MT66 165 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 GMFGO60234 142 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 ADAM11O75078 769 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 SMIM24O75264 130 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 UTS2O95399 124 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 ANGPTL1O95841 491 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 JUNP05412 331 aaKnown RBP12.68□□□□□ -0.38
NFE4-201ENST00000420058 MAP3K8P41279 467 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 CTBP2P56545 445 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 CLCQ05315 142 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 C17orf67Q0P5P2 114 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 ZNF155Q12901 538 aaPredicted RBP12.68□□□□□ -0.38
NFE4-201ENST00000420058 DECR1Q16698 335 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 GRAMD1BQ3KR37 738 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 OR2L13Q8N349 312 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 GTPBP8Q8N3Z3 284 aaPredicted RBP12.68□□□□□ -0.38
NFE4-201ENST00000420058 POC1BQ8TC44 478 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 TMEM158Q8WZ71 300 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 TRMT61AQ96FX7 289 aaKnown RBP12.68□□□□□ -0.38
NFE4-201ENST00000420058 MRPL57Q9BQC6 102 aaKnown RBP12.68□□□□□ -0.38
NFE4-201ENST00000420058 LMF2Q9BU23 707 aaKnown RBP12.68□□□□□ -0.38
NFE4-201ENST00000420058 PRRG4Q9BZD6 226 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 GLIPR2Q9H4G4 154 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 ACSS3Q9H6R3 686 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 ZDHHC18Q9NUE0 388 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 SIRT5Q9NXA8 310 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 TAS2R7Q9NYW3 318 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 GDF2Q9UK05 429 aaPredicted RBP12.68□□□□□ -0.38
NFE4-201ENST00000420058 VDAC3Q9Y277 283 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 RNF115Q9Y4L5 304 aa12.68□□□□□ -0.38
NFE4-201ENST00000420058 YLPM1P49750 1951 aaKnown RBP12.67□□□□□ -0.38
NFE4-201ENST00000420058 DPRXA6NFQ7 191 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 PHF1O43189 567 aaPredicted RBP12.67□□□□□ -0.38
NFE4-201ENST00000420058 EFNA2O43921 213 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 IFNA2P01563 188 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 DDCP20711 480 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 AGTR1P30556 359 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 RAC1P63000 192 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 CSTF3Q12996 717 aaKnown RBP12.67□□□□□ -0.38
NFE4-201ENST00000420058 HEPACAMQ14CZ8 416 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 TAB1Q15750 504 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 ZNF672Q499Z4 452 aaPredicted RBP12.67□□□□□ -0.38
NFE4-201ENST00000420058 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 TMEM107Q6UX40 140 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 NUFIP2Q7Z417 695 aaKnown RBP12.67□□□□□ -0.38
NFE4-201ENST00000420058 OR4C3Q8NH37 302 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 HOXB13Q92826 284 aaPredicted RBP12.67□□□□□ -0.38
NFE4-201ENST00000420058 FBXW5Q969U6 566 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 ELP4Q96EB1 424 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 ZBED6CLQ96FA7 236 aaPredicted RBP12.67□□□□□ -0.38
NFE4-201ENST00000420058 BBS4Q96RK4 519 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 EBPLQ9BY08 206 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 FUT8Q9BYC5 575 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 C12orf49Q9H741 205 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 GLRX2Q9NS18 164 aa12.67□□□□□ -0.38
NFE4-201ENST00000420058 GNG14A0A1W2PPG7 69 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 TNFSF11O14788 317 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 CLOCKO15516 846 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 COQ9O75208 318 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 ULK1O75385 1050 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 PLGP00747 810 aaPredicted RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 F12P00748 615 aaPredicted RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 TP53P04637 393 aaPredicted RBP12.66□□□□□ -0.38
NFE4-201ENST00000420058 COL6A2P12110 1019 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 ZNF17P17021 662 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 SHC1P29353 583 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 TIA1P31483 386 aaKnown RBP eCLIP12.66□□□□□ -0.38
NFE4-201ENST00000420058 GABRA3P34903 492 aa12.66□□□□□ -0.38
NFE4-201ENST00000420058 NCBP2P52298 156 aaKnown RBP eCLIP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms