RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 NDUFB7P17568 137 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 MYL12AP19105 171 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 GSTM3P21266 225 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 IDSP22304 550 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 HOXD10P28358 340 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 GTF2E2P29084 291 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CCND3P30281 292 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CORO1AP31146 461 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 FGF9P31371 208 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 GABRA5P31644 462 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 GRK5P34947 590 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 RCVRNP35243 200 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 THPOP40225 353 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CRYBB2P43320 205 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 RFX2P48378 723 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CRYBA2P53672 197 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 AP2S1P53680 142 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CDH12P55289 794 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 WDR5P61964 334 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 BTG1P62324 171 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 RPS24P62847 133 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CDK6Q00534 326 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 BDH1Q02338 343 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 IRF8Q02556 426 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 UBE3AQ05086 875 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 EEF1A2Q05639 463 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 BCL2L1Q07817 233 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 RAB40BQ12829 278 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 PPP1R8Q12972 351 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 EIF2B5Q13144 721 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CHIT1Q13231 466 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 MAB21L1Q13394 359 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CDH18Q13634 790 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 SCARB2Q14108 478 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 HEPACAMQ14CZ8 416 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 ARHGEF6Q15052 776 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 PTGES3Q15185 160 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 MED22Q15528 200 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CHRNA6Q15825 494 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 ZNF79Q15937 498 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 SSX1Q16384 188 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CDKN3Q16667 212 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 EXOC3L2Q2M3D2 409 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 C18orf21Q32NC0 220 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 PTCHD3Q3KNS1 767 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 BCL7AQ4VC05 210 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 KLHL22Q53GT1 634 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 PLAC9Q5JTB6 97 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 PDZK1Q5T2W1 519 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 MFSD4BQ5TF39 518 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 FAM219BQ5XKK7 198 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 TRIQKQ629K1 86 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 C12orf73Q69YU5 71 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 FRMPD2BQ6IN97 320 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 ZNF770Q6IQ21 691 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 ZNF425Q6IV72 752 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 REEP3Q6NUK4 255 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 MZT2AQ6P582 158 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 FAM131AQ6UXB0 335 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CASP12Q6UXS9 341 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 IDO2Q6ZQW0 420 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 TPRG1Q6ZUI0 275 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 TSEN54Q7Z6J9 526 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 GATAD2AQ86YP4 633 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 DENND1CQ8IV53 801 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CCDC28AQ8IWP9 274 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 FAM217AQ8IXS0 508 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 C10orf111Q8N326 155 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CLIP4Q8N3C7 705 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 FAM109AQ8N4B1 249 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 NANOGP1Q8N7R0 232 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 ZNF557Q8N988 423 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 PCSK9Q8NBP7 692 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 ATAD1Q8NBU5 361 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 DUSP18Q8NEJ0 188 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 KLHDC9Q8NEP7 349 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CLHC1Q8NHS4 586 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 SUN5Q8TC36 379 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 UTP15Q8TED0 518 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 CREB3L4Q8TEY5 395 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 DNAJA4Q8WW22 397 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 ASZ1Q8WWH4 475 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 BRI3BPQ8WY22 251 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 ACOT12Q8WYK0 555 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 EID2BQ96D98 161 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 WDR34Q96EX3 536 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 APIPQ96GX9 242 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 HYLS1Q96M11 299 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 VPS35Q96QK1 796 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 MCCC1Q96RQ3 725 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 DHRS9Q9BPW9 319 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 SLC35A5Q9BS91 424 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 TMEM175Q9BSA9 504 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 BBS2Q9BXC9 721 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 TEX12Q9BXU0 123 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 POLDIP3Q9BY77 421 aaKnown RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 UCK2Q9BZX2 261 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 TINAGL1Q9GZM7 467 aaPredicted RBP3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 PIGUQ9H490 435 aa3.31□□□□□ -1.88
RNU6-55P-201ENST00000411092 REEP4Q9H6H4 257 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms