RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 NR5A2O00482 541 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 ABCD4O14678 606 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 SURF4O15260 269 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 CFLARO15519 480 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 B4GAT1O43505 415 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 KIAA0513O60268 411 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 TRIM3O75382 744 aaPredicted RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 UPK3AO75631 287 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 TSPAN12O95859 305 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 FCER2P06734 321 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 GSTA1P08263 222 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 PRR23D2P0DMB1 279 aaPredicted RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 CPN2P22792 545 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 NMT1P30419 496 aaKnown RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 MAT2AP31153 395 aaKnown RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 NUP62P37198 522 aaPredicted RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 OSTNP61366 133 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 RPS4XP62701 263 aaKnown RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 MRPS6P82932 125 aaKnown RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 C3AR1Q16581 482 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 KLHL40Q2TBA0 621 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 PIP5KL1Q5T9C9 394 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 RAET1LQ5VY80 246 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 ZNF329Q86UD4 541 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 TGIF2LXQ8IUE1 241 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 DND1Q8IYX4 353 aaKnown RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 SLC22A15Q8IZD6 547 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 OR5T2Q8NGG2 359 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 OR4D10Q8NGI6 311 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 NANPQ8TBE9 248 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 M1APQ8TC57 530 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 HAVCR1Q96D42 359 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 DUX3Q96PT4 197 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 BPIFA3Q9BQP9 254 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 CXXC4Q9H2H0 198 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 IL1RL2Q9HB29 575 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 MCCC2Q9HCC0 563 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 MED17Q9NVC6 651 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 FAM120CQ9NX05 1096 aaKnown RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 ADAM28Q9UKQ2 775 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 IKZF3Q9UKT9 509 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 WIPI2Q9Y4P8 454 aa4.35□□□□□ -1.71
LSM5-206ENST00000409987 KLF2Q9Y5W3 355 aaPredicted RBP4.35□□□□□ -1.71
LSM5-206ENST00000409987 hCG_38984A0A1B0GV85 526 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 ESYT2A0FGR8 921 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 FBLL1A6NHQ2 334 aaKnown RBP4.34□□□□□ -1.71
LSM5-206ENST00000409987 SHISA7A6NL88 538 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 SUPT3HB4E1H0 165 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 SIGLEC5O15389 551 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 NBR2O15453 112 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 CEACAM4O75871 244 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 FGF19O95750 216 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 PGK1P00558 417 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 NPPAP01160 153 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 IGLV1-44P01699 117 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 MYOGP15173 224 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 C4BPBP20851 252 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 FEN1P39748 380 aaKnown RBP4.34□□□□□ -1.71
LSM5-206ENST00000409987 MMP12P39900 470 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 SLC11A1P49279 550 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 CLDN8P56748 225 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 RPS15P62841 145 aaKnown RBP4.34□□□□□ -1.71
LSM5-206ENST00000409987 ZP4Q12836 540 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 TMEM187Q14656 261 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 HLA-BQ31612 363 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 XKR7Q5GH72 579 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 DOK6Q6PKX4 331 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 ZNF562Q6V9R5 426 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 TMEM184AQ6ZMB5 413 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 Q6ZVQ6 151 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 CENPQQ7L2Z9 268 aaPredicted RBP4.34□□□□□ -1.71
LSM5-206ENST00000409987 NET1Q7Z628 596 aaPredicted RBP4.34□□□□□ -1.71
LSM5-206ENST00000409987 KIAA1328Q86T90 577 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 KATNAL2Q8IYT4 538 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 SLC38A6Q8IZM9 456 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 LINC00518Q8N0U6 118 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 C8orf46Q8TAG6 207 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 FAM81AQ8TBF8 368 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 MYLPFQ96A32 169 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 PNPLA2Q96AD5 504 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 UPRTQ96BW1 309 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 LRRC39Q96DD0 335 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 AMDHD1Q96NU7 426 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 ZNF300Q96RE9 604 aaPredicted RBP4.34□□□□□ -1.71
LSM5-206ENST00000409987 RBM4Q9BWF3 364 aaKnown RBP4.34□□□□□ -1.71
LSM5-206ENST00000409987 HOXD1Q9GZZ0 328 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 GLT8D2Q9H1C3 349 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 TMEM185BQ9H7F4 350 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 SCRT2Q9NQ03 307 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 GPR83Q9NYM4 423 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 GNG12Q9UBI6 72 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 PISDQ9UG56 409 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 ZNF639Q9UID6 485 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 ERRFI1Q9UJM3 462 aaPredicted RBP4.34□□□□□ -1.71
LSM5-206ENST00000409987 CSNK1G3Q9Y6M4 447 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 KDM5BQ9UGL1 1544 aa4.34□□□□□ -1.71
LSM5-206ENST00000409987 BCORL1Q5H9F3 1711 aa4.33□□□□□ -1.72
LSM5-206ENST00000409987 MADDQ8WXG6 1647 aa4.33□□□□□ -1.72
LSM5-206ENST00000409987 UACAQ9BZF9 1416 aa4.33□□□□□ -1.72
LSM5-206ENST00000409987 NINLQ9Y2I6 1382 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms