RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 COPS7AQ9UBW8 275 aa13□□□□□ -0.33
GPNMB-203ENST00000409458 CFL2Q9Y281 166 aa13□□□□□ -0.33
GPNMB-203ENST00000409458 ORC6Q9Y5N6 252 aa13□□□□□ -0.33
GPNMB-203ENST00000409458 B3GALT1Q9Y5Z6 326 aa13□□□□□ -0.33
GPNMB-203ENST00000409458 CDHR4A6H8M9 788 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 FRG2CA6NGY1 282 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 SAGE2PA6NJ88 616 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 CPSF4LA6NMK7 179 aaKnown RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 LRP3O75074 770 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 CSO75390 466 aaKnown RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 POLR2IP36954 125 aaKnown RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 PPICP45877 212 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 RAD23AP54725 363 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 MYBPC1Q00872 1141 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 SEC23BQ15437 767 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 RFX4Q33E94 735 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 FAM69BQ5VUD6 431 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 RAB11FIP2Q7L804 512 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 METTL21AQ8WXB1 218 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 MR1Q95460 341 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 FEVQ99581 238 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 PSD2Q9BQI7 771 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 FUZQ9BT04 418 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 CRB3Q9BUF7 120 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 G6PC3Q9BUM1 346 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 KRT84Q9NSB2 600 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 FAM118AQ9NWS6 357 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 NTNG1Q9Y2I2 539 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 C2orf92A0A1B0GVN3 265 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 MAGEA13PA6NCF6 341 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 NPIPB9F8W1W9 429 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 KLK3P07288 261 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 ITGAMP11215 1152 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 CYP4B1P13584 511 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 GPR143P51810 404 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 ZNF136P52737 540 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 RAB15P59190 212 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 TAS2R41P59536 307 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 DCAF12Q5T6F0 453 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 ZNF770Q6IQ21 691 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 KRT80Q6KB66 452 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 DHRS13Q6UX07 377 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 PIP4P1Q86T03 277 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 SLCO6A1Q86UG4 719 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 ZNF614Q8N883 585 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 GALNT6Q8NCL4 622 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 DIO2Q92813 273 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 EFHD2Q96C19 240 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 LIN37Q96GY3 246 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 LCORQ96JN0 433 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 NIPSNAP1Q9BPW8 284 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 WDR77Q9BQA1 342 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 FNDC11Q9BVV2 318 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 NRSN2Q9GZP1 204 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 WWTR1Q9GZV5 400 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 RIBC2Q9H4K1 309 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 WDR54Q9H977 334 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 PISDQ9UG56 409 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 GPN3Q9UHW5 284 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 ZNF223Q9UK11 482 aaPredicted RBP12.99□□□□□ -0.33
GPNMB-203ENST00000409458 PCDHGA1Q9Y5H4 931 aa12.99□□□□□ -0.33
GPNMB-203ENST00000409458 OTOGLQ3ZCN5 2332 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 A0A1W2PNU3 283 aaPredicted RBP12.98□□□□□ -0.33
GPNMB-203ENST00000409458 A0A1W2PRQ8 180 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 ARRDC5A6NEK1 342 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 TMX2-CTNND1H3BSU7 103 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 MT-CO3P00414 261 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 CCNYL3P0C7X3 344 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 PRG2P13727 222 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 ANXA8P13928 327 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 DRD5P21918 477 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 CBLP22681 906 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 DGCR6Q14129 220 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 ZNF141Q15928 474 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 ENTPD8Q5MY95 495 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 DCST1Q5T197 706 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 TMEM205Q6UW68 189 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 ZNF517Q6ZMY9 492 aaPredicted RBP12.98□□□□□ -0.33
GPNMB-203ENST00000409458 AQP11Q8NBQ7 271 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 ZNF555Q8NEP9 628 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 NFAM1Q8NET5 270 aaPredicted RBP12.98□□□□□ -0.33
GPNMB-203ENST00000409458 SLC7A13Q8TCU3 470 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 C8orf44Q96CB5 159 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 MCHR1Q99705 422 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 PRRX2Q99811 253 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 PNPLA3Q9NST1 481 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 FLRT3Q9NZU0 649 aa12.98□□□□□ -0.33
GPNMB-203ENST00000409458 NXT1Q9UKK6 140 aaKnown RBP12.98□□□□□ -0.33
GPNMB-203ENST00000409458 CDC14CA4D256 554 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 OR6C76A6NM76 312 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 FAAHO00519 579 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 AP3D1O14617 1153 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 STK17BO94768 372 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 IL33O95760 270 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 CYC1P08574 325 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 GKN3PP0CG01 181 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 HTR2AP28223 471 aa12.97□□□□□ -0.33
GPNMB-203ENST00000409458 ATP12AP54707 1039 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms