RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ARRDC2Q8TBH0 407 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 C10orf90Q96M02 699 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 KATNBL1Q9H079 304 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ASB6Q9NWX5 421 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 IL36AQ9UHA7 158 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 USP3Q9Y6I4 520 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 AKR7A2O43488 359 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TACR1P25103 407 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 IL12BP29460 328 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 PBX2P40425 430 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 SNRPGP62308 76 aaKnown RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ZBTB37Q5TC79 503 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TRAM1L1Q8N609 369 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF417Q8TAU3 575 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 FAM46BQ96A09 425 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 APMAPQ9HDC9 416 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ZFP57Q9NU63 452 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 GON4LQ3T8J9 2241 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TRBV23OR9-2A0A075B6M9 112 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TVP23AA6NH52 213 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 J3KTA2 159 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF208O43345 1280 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 TGFBR1P36897 503 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 GPR143P51810 404 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 FAM83HQ6ZRV2 1179 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 SIAH3Q8IW03 269 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 RASGEF1AQ8N9B8 481 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 OR5AK2Q8NH90 309 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 ACOT11Q8WXI4 607 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 LRRC46Q96FV0 321 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 NIPSNAP1Q9BPW8 284 aa16.69■□□□□ 0.26
SMPD4-202ENST00000409031 MTHFD2LQ9H903 347 aaPredicted RBP16.69■□□□□ 0.26
SMPD4-202ENST00000409031 MTMR11A4FU01 709 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 E9PI62 339 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SLC14A2Q15849 920 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 CBARPQ8N350 705 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF385DQ9H6B1 395 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 TRAPPC4Q9Y296 219 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 GGT3PA6NGU5 568 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SCO1O75880 301 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 KCNK2O95069 426 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 CSTBP04080 98 aaKnown RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 HCKP08631 526 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 ITGA5P08648 1049 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 THEGLP0DJG4 465 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 ACP5P13686 325 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SPNP16150 400 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 CD79BP40259 229 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 CRYZQ08257 329 aaKnown RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 GPR176Q14439 515 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 TP53I3Q53FA7 332 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 GAREM2Q75VX8 874 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 NPAS4Q8IUM7 802 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 CELF5Q8N6W0 485 aaKnown RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 LSMEM1Q8N8F7 131 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF689Q96CS4 500 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 TMEM43Q9BTV4 400 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 IL26Q9NPH9 171 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 RTCAO00442 366 aaKnown RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 GAPDHSO14556 408 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 OR7A17O14581 309 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 GNRH1P01148 92 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 HSD11B1P28845 292 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 STK19P49842 368 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 TAS2R31P59538 309 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 CCDC190Q86UF4 302 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SMPDL3BQ92485 455 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 ZBTB8AQ96BR9 441 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 OR5B12Q96R08 314 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 IFT22Q9H7X7 185 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 MED17Q9NVC6 651 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SLCO3A1Q9UIG8 710 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 CFAP20Q9Y6A4 193 aaKnown RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF736B4DX44 427 aaPredicted RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 AGPAT2O15120 278 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 RNF13O43567 381 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SLC16A8O95907 504 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SLC10A3P09131 477 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SOX9P48436 509 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 ZNF674Q2M3X9 581 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 PGGHGQ32M88 737 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 HENMT1Q5T8I9 393 aaKnown RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 SFXN4Q6P4A7 337 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 DGLUCYQ7Z3D6 616 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 NANOGP1Q8N7R0 232 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 MDGA1Q8NFP4 955 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 OVCA2Q8WZ82 227 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 URM1Q9BTM9 101 aaKnown RBP16.68■□□□□ 0.26
SMPD4-202ENST00000409031 EPHA6Q9UF33 1036 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 CAMK2AQ9UQM7 478 aa16.68■□□□□ 0.26
SMPD4-202ENST00000409031 ADAM12O43184 909 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 SYPP08247 313 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 OR8U9P0C7N5 309 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 ATXN1LP0C7T5 689 aaKnown RBP16.67■□□□□ 0.26
SMPD4-202ENST00000409031 GPR26Q8NDV2 337 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 OR5M3Q8NGP4 307 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 OR4K13Q8NH42 304 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 SLC22A8Q8TCC7 542 aa16.67■□□□□ 0.26
SMPD4-202ENST00000409031 WFIKKN2Q8TEU8 576 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms