RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 C6orf106Q9H6K1 298 aaPredicted RBP8.59□□□□□ -1.03
HPS4-203ENST00000402105 NIPAL2Q9H841 368 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 C12orf4Q9NQ89 552 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 MRPL39Q9NYK5 338 aaKnown RBP8.59□□□□□ -1.03
HPS4-203ENST00000402105 TRDV1A0A1B0GX56 115 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 SLC9B1P1A6NJY1 282 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 C6P13671 934 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 GSTM3P21266 225 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 GRPRP30550 384 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 CLDN12P56749 244 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 ZNF33BQ06732 778 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 MESP2Q0VG99 397 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 ST3GAL3Q11203 375 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 SLC9A5Q14940 896 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 TRAM2Q15035 370 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 TMEM201Q5SNT2 666 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
HPS4-203ENST00000402105 NR2C2APQ86WQ0 139 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 C9orf62Q8N4C0 152 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 DNAJA3Q96EY1 480 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 PRRC1Q96M27 445 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 AMDHD1Q96NU7 426 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 ZDHHC5Q9C0B5 715 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 NLGN3Q9NZ94 848 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 FBXL4Q9UKA2 621 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 ATG4BQ9Y4P1 393 aa8.59□□□□□ -1.03
HPS4-203ENST00000402105 SCN3AQ9NY46 2000 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 OR52A4PA6NMU1 304 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 A8MVJ9 347 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 RNF13O43567 381 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 EFCAB14O75071 495 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 SLC35G4P0C7Q5 338 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 CERS1P27544 350 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 BSGP35613 385 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 NAA10P41227 235 aaPredicted RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 KHKP50053 298 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 C21orf58P58505 322 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 CDK5Q00535 292 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 SP3Q02447 781 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 SNTA1Q13424 505 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 RAB33AQ14088 237 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 TP53I3Q53FA7 332 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ZC3H14Q6PJT7 736 aaKnown RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 ZNF547Q8IVP9 402 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ARL14Q8N4G2 192 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ACBD7Q8N6N7 88 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ZNF527Q8NB42 609 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 GALNT11Q8NCW6 608 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ZCCHC10Q8TBK6 192 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 DNAJA4Q8WW22 397 aaPredicted RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 METTL2AQ96IZ6 378 aaKnown RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 GDF15Q99988 308 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 MARVELD1Q9BSK0 173 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 GTPBP2Q9BX10 602 aaKnown RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 KCNN2Q9H2S1 579 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 METTL17Q9H7H0 456 aaPredicted RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 SPHK2Q9NRA0 654 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 USP36Q9P275 1121 aaKnown RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 TMEM129A0AVI4 362 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 SERTM1A2A2V5 107 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ANKRD61A6NGH8 418 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ZNF860A6NHJ4 632 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 MID1O15344 667 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 FZD7O75084 574 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 INHAP05111 366 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 MAGEB1P43366 347 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 OR12D2P58182 307 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 TAS2R38P59533 333 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 TSPAN5P62079 268 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 DUSP2Q05923 314 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 SNTB2Q13425 540 aaKnown RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 ELOAQ14241 798 aaKnown RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 AGERQ15109 404 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ODF4Q2M2E3 257 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 TCEAL5Q5H9L2 206 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 OR4C11Q6IEV9 310 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 SLC25A25Q6KCM7 469 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 C1orf94Q6P1W5 598 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 ZNF322Q6U7Q0 402 aaPredicted RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 TEX261Q6UWH6 196 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 TMEM91Q6ZNR0 172 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 KCT2Q8NC54 265 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 KREMEN2Q8NCW0 462 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 NUP43Q8NFH3 380 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 OR2T33Q8NG76 320 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 OR4D9Q8NGE8 314 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 OR5W2Q8NH69 310 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 GIMAP1Q8WWP7 306 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 C4orf36Q96KX1 117 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 SGPP1Q9BX95 441 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 HCAR1Q9BXC0 346 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 HMX1Q9NP08 348 aaPredicted RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 ADAP2Q9NPF8 381 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 U3KQ87 197 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 TRAV27A0A087WT01 109 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 FAM171A2A8MVW0 826 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 CDC42EP2O14613 210 aa8.58□□□□□ -1.04
HPS4-203ENST00000402105 RGS9O75916 674 aaPredicted RBP8.58□□□□□ -1.04
HPS4-203ENST00000402105 TCRBP04435 133 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms