RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 OR4C3Q8NH37 302 aa14.35□□□□□ -0.11
ATG4B-203ENST00000400772 PSMA8Q8TAA3 256 aa14.35□□□□□ -0.11
ATG4B-203ENST00000400772 OTUB1Q96FW1 271 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-203ENST00000400772 PGM2Q96G03 612 aa14.35□□□□□ -0.11
ATG4B-203ENST00000400772 CENPHQ9H3R5 247 aa14.35□□□□□ -0.11
ATG4B-203ENST00000400772 AKTIPQ9H8T0 292 aa14.35□□□□□ -0.11
ATG4B-203ENST00000400772 CLCF1Q9UBD9 225 aa14.35□□□□□ -0.11
ATG4B-203ENST00000400772 NUP214P35658 2090 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 ALG1L2C9J202 215 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 RCBTB2O95199 551 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 ZWINTO95229 277 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 ANGPTL1O95841 491 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 C6orf47O95873 294 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 HMGN2P05204 90 aaKnown RBP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 TUBBP07437 444 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 DDX5P17844 614 aaKnown RBP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 CAPN3P20807 821 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 PRPS1L1P21108 318 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 SLC1A6P48664 564 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 CLK3P49761 638 aaKnown RBP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 ASCL1P50553 236 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 C21orf58P58505 322 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 PDCD2Q16342 344 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 BCL2A1Q16548 175 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 OR5M1Q8NGP8 315 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 OR5P2Q8WZ92 322 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 WNT2BQ93097 391 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 C1GALT1C1Q96EU7 318 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 DTNBP1Q96EV8 351 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 PPP1R36Q96LQ0 422 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 TBL1XR1Q9BZK7 514 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 CXorf36Q9H7Y0 433 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 KCNK9Q9NPC2 374 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 ZCCHC3Q9NUD5 404 aaKnown RBP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 ASIC5Q9NY37 505 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 JKAMPQ9P055 326 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 HAO1Q9UJM8 370 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 EIF3LQ9Y262 564 aaKnown RBP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-203ENST00000400772 RAP2CQ9Y3L5 183 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 ZNF337Q9Y3M9 751 aa14.34□□□□□ -0.11
ATG4B-203ENST00000400772 MYO9AB2RTY4 2548 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 H0YC42 278 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 HCRTR2O43614 444 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 OXSR1O95747 527 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 TGM6O95932 706 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 IL18BPO95998 194 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 NGFRP08138 427 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 ALOX5P09917 674 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 TMIGD3P0DMS9 266 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 TBXA2RP21731 343 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 UQCRC1P31930 480 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 PRIM2P49643 509 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 RPL14P50914 215 aaKnown RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 SUCLG1P53597 346 aaKnown RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 TPD52P55327 224 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 CLDN8P56748 225 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 C17orf67Q0P5P2 114 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 GANABQ14697 944 aaKnown RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 LASP1Q14847 261 aaKnown RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 TMEM44Q2T9K0 475 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 SMU1Q2TAY7 513 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 CCNJQ5T5M9 372 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 RNASE6Q93091 150 aaKnown RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 STACQ99469 402 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 ZNF559Q9BR84 538 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 BHLHE41Q9C0J9 482 aaPredicted RBP14.33□□□□□ -0.12
ATG4B-203ENST00000400772 PTGES2Q9H7Z7 377 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 ATAD3AQ9NVI7 634 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 GPATCH2Q9NW75 528 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 GIN1Q9NXP7 522 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 SNX8Q9Y5X2 465 aa14.33□□□□□ -0.12
ATG4B-203ENST00000400772 OR2M5A3KFT3 312 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 MYZAPP0CAP1 466 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 PEPDP12955 493 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 OPRM1P35372 400 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 CCT3P49368 545 aaKnown RBP14.32□□□□□ -0.12
ATG4B-203ENST00000400772 DGKQP52824 942 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 WDR4P57081 412 aaKnown RBP14.32□□□□□ -0.12
ATG4B-203ENST00000400772 MYBPHQ13203 477 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 MAD2L1Q13257 205 aaPredicted RBP14.32□□□□□ -0.12
ATG4B-203ENST00000400772 STX3Q13277 289 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 GLYR1Q49A26 553 aaPredicted RBP14.32□□□□□ -0.12
ATG4B-203ENST00000400772 RAET1LQ5VY80 246 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 CDC73Q6P1J9 531 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 CAMKMTQ7Z624 323 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 NATD1Q8N6N6 113 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 CDS1Q92903 461 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 INTS12Q96CB8 462 aaKnown RBP14.32□□□□□ -0.12
ATG4B-203ENST00000400772 PRPF18Q99633 342 aaKnown RBP14.32□□□□□ -0.12
ATG4B-203ENST00000400772 TM9SF2Q99805 663 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 KLHDC3Q9BQ90 382 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 DUSP26Q9BV47 211 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 BTBD2Q9BX70 525 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 PIGUQ9H490 435 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 SLC24A3Q9HC58 644 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 DUSP22Q9NRW4 184 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 PNPOQ9NVS9 261 aa14.32□□□□□ -0.12
ATG4B-203ENST00000400772 NOP53Q9NZM5 478 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms