RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 POMT2Q9UKY4 750 aa6.71□□□□□ -1.34
SMAD1-202ENST00000394092 SLC7A7Q9UM01 511 aa6.71□□□□□ -1.34
SMAD1-202ENST00000394092 MRPS33Q9Y291 106 aaKnown RBP6.71□□□□□ -1.34
SMAD1-202ENST00000394092 GSTK1Q9Y2Q3 226 aa6.71□□□□□ -1.34
SMAD1-202ENST00000394092 GPR55Q9Y2T6 319 aaPredicted RBP6.71□□□□□ -1.34
SMAD1-202ENST00000394092 CACNA1IQ9P0X4 2223 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 CDH23Q9H251 3354 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 LOC105369274A0A096LPK9 316 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 LOC102723532A0A0G2JNH3 316 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 SPTY2D1-AS1A0A0U1RR47 76 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 IQCMA0A1B0GVH7 501 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 KRBA1A5PL33 1030 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 OR5K3A6NET4 321 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF860A6NHJ4 632 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 C10orf142B7Z368 130 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 SURF4O15260 269 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 TBX1O43435 398 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 AKAP8O43823 692 aaKnown RBP6.7□□□□□ -1.34
SMAD1-202ENST00000394092 FGF17O60258 216 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 FCMRO60667 390 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 ZIC2O95409 532 aaPredicted RBP6.7□□□□□ -1.34
SMAD1-202ENST00000394092 APOA1P02647 267 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 ADRA2AP08913 450 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 THEGLP0DJG4 465 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 GNSP15586 552 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 BMP7P18075 431 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 TRHRP34981 398 aaPredicted RBP6.7□□□□□ -1.34
SMAD1-202ENST00000394092 RPS3AP61247 264 aaKnown RBP6.7□□□□□ -1.34
SMAD1-202ENST00000394092 HHEXQ03014 270 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF155Q12901 538 aaPredicted RBP6.7□□□□□ -1.34
SMAD1-202ENST00000394092 CCINQ13939 588 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 PRICKLE4Q2TBC4 344 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 NXNL2Q5VZ03 156 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 SLC22A16Q86VW1 577 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 PARGQ86W56 976 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 NKAIN4Q8IVV8 208 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 OR4N5Q8IXE1 308 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 OR4N4Q8N0Y3 316 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 SLC22A18ASQ8N1D0 253 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 CA13Q8N1Q1 262 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 SLC43A2Q8N370 569 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 CLIP4Q8N3C7 705 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 PARP16Q8N5Y8 322 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 POGLUT1Q8NBL1 392 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 PSD4Q8NDX1 1056 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 OR8D4Q8NGM9 314 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 FANK1Q8TC84 345 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 AP3S1Q92572 193 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF559Q9BR84 538 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 SLC30A2Q9BRI3 323 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 SEMA6CQ9H3T2 930 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 FN3KQ9H479 309 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 C6orf106Q9H6K1 298 aaPredicted RBP6.7□□□□□ -1.34
SMAD1-202ENST00000394092 IL21RQ9HBE5 538 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 GPR27Q9NS67 375 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 MAT2BQ9NZL9 334 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 CLEC2DQ9UHP7 191 aa6.7□□□□□ -1.34
SMAD1-202ENST00000394092 SPIN1Q9Y657 262 aaPredicted RBP6.7□□□□□ -1.34
SMAD1-202ENST00000394092 TDRD6O60522 2096 aaKnown RBP6.7□□□□□ -1.34
SMAD1-202ENST00000394092 FAM86C2PA6NEL3 165 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 UNC119BA6NIH7 251 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 TTC36A6NLP5 189 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 CYR61O00622 381 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 KLF4O43474 513 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 OR10H2O60403 315 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 LDB3O75112 727 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 RCBTB2O95199 551 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 IGHV4-34P06331 123 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 SLC35E2P0CK97 266 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 PAICSP22234 425 aaKnown RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 HTR1FP30939 366 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 GABRA5P31644 462 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 CRYBB2P43320 205 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 GPR4P46093 362 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 GCGRP47871 477 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 VSX2P58304 361 aaPredicted RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 IFITM3Q01628 133 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 TPBGQ13641 420 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 PLK5Q496M5 336 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 TRMT12Q53H54 448 aaKnown RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 SOWAHCQ53LP3 525 aaPredicted RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 MRPL2Q5T653 305 aaKnown RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 LIPKQ5VXJ0 399 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 SLC30A6Q6NXT4 461 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 ZNF613Q6PF04 617 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 DGLUCYQ7Z3D6 616 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 WDR53Q7Z5U6 358 aaPredicted RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 BCDIN3DQ7Z5W3 292 aaKnown RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 CCDC190Q86UF4 302 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 VWA5B2Q8N398 1253 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 KLHL36Q8N4N3 616 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 C19orf47Q8N9M1 422 aaKnown RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 POC5Q8NA72 575 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 OR52N1Q8NH53 320 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 SETD6Q8TBK2 473 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 BRIX1Q8TDN6 353 aaKnown RBP6.69□□□□□ -1.34
SMAD1-202ENST00000394092 GPR151Q8TDV0 419 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 TMEM255BQ8WV15 326 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 TMEM239Q8WW34 195 aa6.69□□□□□ -1.34
SMAD1-202ENST00000394092 SLC35B4Q969S0 331 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms