RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 IRF8Q02556 426 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TDGQ13569 410 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 GBX1Q14549 363 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 PTPRNQ16849 979 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ANXA8L1Q5VT79 327 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 C2CD4AQ8NCU7 369 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 APOLD1Q96LR9 279 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 PTCHD1Q96NR3 888 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ALG8Q9BVK2 526 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ZDHHC5Q9C0B5 715 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SLITRK2Q9H156 845 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 CACNG4Q9UBN1 327 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 GOLGB1Q14789 3259 aaKnown RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SMIM28A0A1B0GU29 152 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 PRRG1O14668 218 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MBTPS2O43462 519 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 NME6O75414 186 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 AQP8O94778 261 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SNAI1O95863 264 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 C1GALT1C1LP0DN25 315 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TPT1P13693 172 aaKnown RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 PBX3P40426 434 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MRPS6P82932 125 aaKnown RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TAP2Q03519 686 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 IRF4Q15306 451 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 C8orf82Q6P1X6 216 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 CERS6Q6ZMG9 384 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF783Q6ZMS7 281 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ABI3BPQ7Z7G0 1075 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ISCA2Q86U28 154 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 C15orf54Q8N8G6 183 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MFSD8Q8NHS3 518 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MRPS31Q92665 395 aaKnown RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RAD9AQ99638 391 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 EPYCQ99645 322 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 GPR21Q99679 349 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MICU1Q9BPX6 476 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 KCNH6Q9H252 994 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TCEAL2Q9H3H9 227 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 FZD4Q9ULV1 537 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ANGPT4Q9Y264 503 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 NUP214P35658 2090 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TVP23AA6NH52 213 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ZNF587BE7ETH6 402 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 M0R143 59 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ECI2O75521 394 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SLC34A2O95436 690 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 CXCL14O95715 111 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SULT1A3P0DMM9 295 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SULT1A4P0DMN0 295 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 FGF7P21781 194 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RPL3P39023 403 aaKnown RBP7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SELENOPP49908 381 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RBBP4Q09028 425 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 NOGQ13253 232 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 GTF2H2Q13888 395 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 SSX1Q16384 188 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 LDLRAD1Q5T700 205 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 OR2G6Q5TZ20 316 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 GTF2H2CQ6P1K8 395 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TSSK4Q6SA08 328 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 TPGS1Q6ZTW0 290 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 HAVCR1Q96D42 359 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 MSLNLQ96KJ4 702 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ELOVL4Q9GZR5 314 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 ISYNA1Q9NPH2 558 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 NDUFB11Q9NX14 153 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 RHCGQ9UBD6 479 aa7.2□□□□□ -1.26
VTI1A-201ENST00000393077 C7orf66A4D0T2 115 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 QSOX1O00391 747 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 TLR5O60602 858 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 KERAO60938 352 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 RECKO95980 971 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 PCCBP05166 539 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ASGR1P07306 291 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 RHOP08100 348 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 HOXC6P09630 235 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 SBK3P0C264 359 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 CALCRP30988 508 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 IFNGR2P38484 337 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 AQP2P41181 271 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 GATMP50440 423 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 CRYBB1P53674 252 aaPredicted RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 WNT3AP56704 352 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ACSM2AQ08AH3 577 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 HYAL4Q2M3T9 481 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 THEM4Q5T1C6 240 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 ACSM2BQ68CK6 577 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 TANGO2Q6ICL3 276 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 OR4F3Q6IEY1 312 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 NPAS3Q8IXF0 933 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 KRTCAP2Q8N6L1 136 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 OR2L8Q8NGY9 312 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 POC1BQ8TC44 478 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 C16orf78Q8WTQ4 265 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 SETD7Q8WTS6 366 aaKnown RBP7.19□□□□□ -1.26
VTI1A-201ENST00000393077 RNF141Q8WVD5 230 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 MRGPRX2Q96LB1 330 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 CAMK1GQ96NX5 476 aa7.19□□□□□ -1.26
VTI1A-201ENST00000393077 PKP4Q99569 1192 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms