RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 HOXB13Q92826 284 aaPredicted RBP6.27□□□□□ -1.41
TRAV27-201ENST00000390457 MTBPQ96DY7 904 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 PLPPR2Q96GM1 343 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 GMPPAQ96IJ6 420 aaPredicted RBP6.27□□□□□ -1.41
TRAV27-201ENST00000390457 HBEGFQ99075 208 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 NPAS1Q99742 590 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 REG4Q9BYZ8 158 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 ACSS3Q9H6R3 686 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 SLC35C2Q9NQQ7 365 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 ZDHHC18Q9NUE0 388 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 SIRT5Q9NXA8 310 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 TAS2R9Q9NYW1 312 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 TAS2R7Q9NYW3 318 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 PPP4R1LQ9P1A2 415 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 XPR1Q9UBH6 696 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 TMCO1Q9UM00 188 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 SNX6Q9UNH7 406 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 C19orf53Q9UNZ5 99 aaPredicted RBP6.27□□□□□ -1.41
TRAV27-201ENST00000390457 GPR52Q9Y2T5 361 aa6.27□□□□□ -1.41
TRAV27-201ENST00000390457 SERTM1A2A2V5 107 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 A8MT66 165 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 SHISA8B8ZZ34 492 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 H3BML4 177 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 UPK1AO00322 258 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 TLX2O43763 284 aaPredicted RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 CD5LO43866 347 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 IGKV1D-16P01601 117 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 CD8AP01732 235 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 COL6A2P12110 1019 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 FCGR2AP12318 317 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 TSPAN8P19075 237 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 KRT20P35900 424 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 HTR6P50406 440 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 RPS3AP61247 264 aaKnown RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 PRR5P85299 388 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 CLCQ05315 142 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 DMTNQ08495 405 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 CSTF3Q12996 717 aaKnown RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 ETFDHQ16134 617 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 EXOC3L2Q2M3D2 409 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 ERCC6LQ2NKX8 1250 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 UNC50Q53HI1 259 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 SWT1Q5T5J6 900 aaKnown RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 HMBOX1Q6NT76 420 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 MFSD12Q6NUT3 480 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 MARCH3Q86UD3 253 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 GABRG1Q8N1C3 465 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 OR2L13Q8N349 312 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 AKAP1Q92667 903 aaKnown RBP eCLIP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 GFM2Q969S9 779 aaKnown RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 EXOSC8Q96B26 276 aaKnown RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 APIPQ96GX9 242 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 KLHDC3Q9BQ90 382 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 MRPL57Q9BQC6 102 aaKnown RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 LMF2Q9BU23 707 aaKnown RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 ACPTQ9BZG2 426 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 SHCBP1LQ9BZQ2 653 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 ACTR6Q9GZN1 396 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 VPS11Q9H270 941 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 MRPL46Q9H2W6 279 aaKnown RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 SLCO5A1Q9H2Y9 848 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 PTGES2Q9H7Z7 377 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 SDHAF3Q9NRP4 125 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 NMRK1Q9NWW6 199 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 CLEC4AQ9UMR7 237 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 LAMP3Q9UQV4 416 aa6.26□□□□□ -1.41
TRAV27-201ENST00000390457 NUP214P35658 2090 aaPredicted RBP6.26□□□□□ -1.41
TRAV27-201ENST00000390457 A0A0J9YW62 118 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 C7orf72A4D263 438 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 RNF212BA8MTL3 300 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 ALG1L2C9J202 215 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 CXCL13O43927 109 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 PCDH7O60245 1069 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 NDUFS7O75251 213 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 SMIM24O75264 130 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 SLITRK5O94991 958 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 UTS2O95399 124 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 ANGPTL1O95841 491 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 IGHV4-39P01824 125 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 NGFRP08138 427 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 IFI6P09912 130 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 ZNF17P17021 662 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 DDCP20711 480 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 AGTR1P30556 359 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 TIA1P31483 386 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRAV27-201ENST00000390457 MPIP34949 423 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 IDUAP35475 653 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 ARL1P40616 181 aaPredicted RBP6.25□□□□□ -1.41
TRAV27-201ENST00000390457 EIF1AXP47813 144 aaKnown RBP6.25□□□□□ -1.41
TRAV27-201ENST00000390457 RPS4XP62701 263 aaKnown RBP6.25□□□□□ -1.41
TRAV27-201ENST00000390457 C2orf54Q08AI8 447 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 C17orf67Q0P5P2 114 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 STX5Q13190 355 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 HEPACAMQ14CZ8 416 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 DECR1Q16698 335 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 PGGHGQ32M88 737 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 EXOSC6Q5RKV6 272 aaKnown RBP6.25□□□□□ -1.41
TRAV27-201ENST00000390457 NCMAPQ5T1S8 102 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 LCE2CQ5TA81 110 aa6.25□□□□□ -1.41
TRAV27-201ENST00000390457 LGSNQ5TDP6 509 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms