RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ZNF556Q9HAH1 456 aa3.49□□□□□ -1.85
SMC6-202ENST00000381272 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.49□□□□□ -1.85
SMC6-202ENST00000381272 PLCXD1Q9NUJ7 323 aa3.49□□□□□ -1.85
SMC6-202ENST00000381272 FKBP14Q9NWM8 211 aa3.49□□□□□ -1.85
SMC6-202ENST00000381272 IMPAD1Q9NX62 359 aa3.49□□□□□ -1.85
SMC6-202ENST00000381272 GIN1Q9NXP7 522 aa3.49□□□□□ -1.85
SMC6-202ENST00000381272 PAIP2BQ9ULR5 123 aaKnown RBP3.49□□□□□ -1.85
SMC6-202ENST00000381272 POFUT2Q9Y2G5 429 aa3.49□□□□□ -1.85
SMC6-202ENST00000381272 TMEM98Q9Y2Y6 226 aa3.49□□□□□ -1.85
SMC6-202ENST00000381272 PCDHGB6Q9Y5F9 930 aa3.49□□□□□ -1.85
SMC6-202ENST00000381272 PCYT1BQ9Y5K3 369 aaPredicted RBP3.49□□□□□ -1.85
SMC6-202ENST00000381272 NOTCH4Q99466 2003 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 PDE4DIPQ5VU43 2346 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 KIF26AQ9ULI4 1882 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 LTBP2Q14767 1821 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 LAMA3Q16787 3333 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 TRBV4-1A0A0J9YWV2 114 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 FEZF1A0PJY2 475 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 TSPAN11A1L157 253 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 ANTXRLA6NF34 631 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 ANKDD1BA6NHY2 528 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 A8MU76 341 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 FOXE1O00358 373 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 QSOX1O00391 747 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 FFAR1O14842 300 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 ZW10O43264 779 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 KIAA0513O60268 411 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 ENTPD6O75354 484 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 POP7O75817 140 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 UPK1BO75841 260 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 KCNK2O95069 426 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 SOX14O95416 240 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 SOD1P00441 154 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 RHOP08100 348 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 CKMT1AP12532 417 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 CCL5P13501 91 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 CSF2RAP15509 400 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 ITGA2P17301 1181 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 PTPN2P17706 415 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 ALOX12P18054 663 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 CD53P19397 219 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 CBLP22681 906 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 FEN1P39748 380 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 MMP12P39900 470 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 NNMTP40261 264 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 EIF2DP41214 584 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 GPR1P46091 355 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 TMED10P49755 219 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 RGS6P49758 472 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 CRISP1P54107 249 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 PNLIPRP1P54315 467 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 LIM2P55344 173 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 DSTNP60981 165 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 WDR5P61964 334 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 TUBA1BP68363 451 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 NKX6-1P78426 367 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 RBBP4Q09028 425 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 FCHO2Q0JRZ9 810 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 PDE7AQ13946 482 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 IRF3Q14653 427 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 TBCEQ15813 527 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 TSTQ16762 297 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 ZNF630Q2M218 657 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 ZNF658BQ4V348 819 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 TCEAL5Q5H9L2 206 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 PLAC9Q5JTB6 97 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 ATAT1Q5SQI0 421 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 TPRG1LQ5T0D9 272 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 DEPDC1Q5TB30 811 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 MLIPQ5VWP3 458 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 PLPP4Q5VZY2 271 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 RAET1GQ6H3X3 334 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 TNFAIP8L2Q6P589 184 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 TRIM40Q6P9F5 258 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 KLHL17Q6TDP4 642 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 CEACAM20Q6UY09 585 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 FAM83HQ6ZRV2 1179 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 LINC00299Q6ZSB3 139 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 NCCRP1Q6ZVX7 275 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 TUBA1AQ71U36 451 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 UTS2BQ765I0 119 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 CCDC80Q76M96 950 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 OLIG3Q7RTU3 272 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 ANKRD33Q7Z3H0 272 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 WDR53Q7Z5U6 358 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 BCDIN3DQ7Z5W3 292 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 HEATR4Q86WZ0 1026 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 RBM45Q8IUH3 476 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 ARMC8Q8IUR7 673 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 SFTPA1Q8IWL2 248 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 METTL4Q8N3J2 472 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 PARP16Q8N5Y8 322 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 HORMAD2Q8N7B1 307 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 MINDY2Q8NBR6 621 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 DENND6BQ8NEG7 585 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 FAM46DQ8NEK8 389 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 OR5AR1Q8NGP9 310 aa3.48□□□□□ -1.85
SMC6-202ENST00000381272 WDR36Q8NI36 951 aaKnown RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 VANGL1Q8TAA9 524 aaPredicted RBP3.48□□□□□ -1.85
SMC6-202ENST00000381272 SLC5A11Q8WWX8 675 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms