RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TMEM150AQ86TG1 271 aa11.77□□□□□ -0.53
CHD3-203ENST00000380358 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.53
CHD3-203ENST00000380358 SMG8Q8ND04 991 aaKnown RBP11.77□□□□□ -0.53
CHD3-203ENST00000380358 ISOC1Q96CN7 298 aa11.77□□□□□ -0.53
CHD3-203ENST00000380358 CHFRQ96EP1 664 aa11.77□□□□□ -0.53
CHD3-203ENST00000380358 TMEM175Q9BSA9 504 aa11.77□□□□□ -0.53
CHD3-203ENST00000380358 SUSD2Q9UGT4 822 aa11.77□□□□□ -0.53
CHD3-203ENST00000380358 NTSR1P30989 418 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 KDELR2P33947 212 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 RNF151Q2KHN1 245 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 CRELD2Q6UXH1 353 aaPredicted RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 ABHD12BQ7Z5M8 362 aaPredicted RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 SGPP2Q8IWX5 399 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 OR5D16Q8NGK9 328 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 RBPJLQ9UBG7 517 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 DIP2AQ14689 1571 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 ZNF816-ZNF321PA0A0X1KG74 233 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 DFNA5O60443 496 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SLITRK5O94991 958 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 RAB5BP61020 215 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SNTB2Q13425 540 aaKnown RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 NLRC3Q7RTR2 1065 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 CLECL1Q8IZS7 167 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 ZNF321PQ8N8H1 164 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 B3GNT3Q9Y2A9 372 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SEC14L6B5MCN3 397 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 TRAF3IP2O43734 574 aaPredicted RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 SOD2P04179 222 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 ZNF182P17025 639 aaPredicted RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 GMPRP36959 345 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 PIK3CBP42338 1070 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 EXOSC2Q13868 293 aaKnown RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 ZNF404Q494X3 552 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 PDLIM3Q53GG5 364 aaPredicted RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 BORAQ6PGQ7 559 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 FAM57BQ71RH2 274 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 BTBD2Q9BX70 525 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SLC17A9Q9BYT1 436 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 ARMC1Q9NVT9 282 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 HCFC1R1Q9NWW0 138 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SDHAF2Q9NX18 166 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 TRPM1Q7Z4N2 1603 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 ARPC5O15511 151 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 ZNF630Q2M218 657 aaPredicted RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 ZNF783Q6ZMS7 281 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 TMEM130Q8N3G9 435 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 STEAP2Q8NFT2 490 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 REEP6Q96HR9 211 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 FAM120CQ9NX05 1096 aaKnown RBP11.76□□□□□ -0.53
CHD3-203ENST00000380358 RNF186Q9NXI6 227 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 TXNL1O43396 289 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SC5DO75845 299 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SOX9P48436 509 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 CSNK1A1P48729 337 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 DIO3P55073 304 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SLC5A8Q8N695 610 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 FKBP10Q96AY3 582 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 SLC41A3Q96GZ6 507 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 TPOP07202 933 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 ACRV1P26436 265 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 P2RY2P41231 377 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 OR1D4P47884 311 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 F2RL1P55085 397 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 TAS2R20P59543 309 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 HYLS1Q96M11 299 aa11.76□□□□□ -0.53
CHD3-203ENST00000380358 NSG1A0A0A6YYJ2 146 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 EBLN1P0CF75 366 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 HAPLN1P10915 354 aaPredicted RBP11.75□□□□□ -0.53
CHD3-203ENST00000380358 PVRP15151 417 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 SPOCK1Q08629 439 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 EXOSC7Q15024 291 aaKnown RBP11.75□□□□□ -0.53
CHD3-203ENST00000380358 TMEM25Q86YD3 366 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 NRMQ8IXM6 262 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 BANPQ8N9N5 519 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 OR8J1Q8NGP2 316 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 HUS1BQ8NHY5 278 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 TOE1Q96GM8 510 aaKnown RBP11.75□□□□□ -0.53
CHD3-203ENST00000380358 PHOX2BQ99453 314 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 GPN2Q9H9Y4 310 aaPredicted RBP11.75□□□□□ -0.53
CHD3-203ENST00000380358 ZIM2Q9NZV7 527 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 TMED5Q9Y3A6 229 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 TTLL8A6PVC2 850 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 BHLHE40O14503 412 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 IL4RP24394 825 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 MAT1AQ00266 395 aaKnown RBP11.75□□□□□ -0.53
CHD3-203ENST00000380358 CLEC4DQ8WXI8 215 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 CSNK1G3Q9Y6M4 447 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 SLC9B1P1A6NJY1 282 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 TRAPPC2LH3BP13 241 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 BCAT2O15382 392 aaPredicted RBP11.75□□□□□ -0.53
CHD3-203ENST00000380358 SNRNP70P08621 437 aaKnown RBP11.75□□□□□ -0.53
CHD3-203ENST00000380358 PRPH2P23942 346 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 OPCMLQ14982 345 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 ZNF551Q7Z340 670 aaPredicted RBP11.75□□□□□ -0.53
CHD3-203ENST00000380358 SLC35F2Q8IXU6 374 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 TMIEQ8NEW7 156 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 MYLIPQ8WY64 445 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 ZDHHC7Q9NXF8 308 aa11.75□□□□□ -0.53
CHD3-203ENST00000380358 KLHL21Q9UJP4 597 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms