RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SARGQ9BW04 601 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 DPP7Q9UHL4 492 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 SLC7A7Q9UM01 511 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 POLHQ9Y253 713 aa13.59□□□□□ -0.23
MSH5-201ENST00000375703 ANKRD34BA5PLL1 514 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 FAM183AA6NL82 134 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 NDUFB5O43674 189 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 PTBP1P26599 531 aaKnown RBP eCLIP13.58□□□□□ -0.243e-8■■■□□ 16.6
MSH5-201ENST00000375703 SGCGQ13326 291 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 TJAP1Q5JTD0 557 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 B3GLCTQ6Y288 498 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 FRRS1Q6ZNA5 592 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 KCT2Q8NC54 265 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 DUSP18Q8NEJ0 188 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 OR51G2Q8NGK0 314 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 CDS1Q92903 461 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 ZC3HAV1LQ96H79 300 aaKnown RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 CACYBPQ9HB71 228 aaKnown RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 B3GAT2Q9NPZ5 323 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 HINT3Q9NQE9 182 aaKnown RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 LYARQ9NX58 379 aaKnown RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 PTGFRNQ9P2B2 879 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 NLKQ9UBE8 527 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 ZNF443Q9Y2A4 671 aaPredicted RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 CLCA3PQ9Y6N3 262 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 CDH10Q9Y6N8 788 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 GOLGA4Q13439 2230 aaKnown RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 OR6C70A6NIJ9 312 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 FAM25AB3EWG3 89 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 FAM25CB3EWG5 89 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 FAM25GB3EWG6 89 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 CDC42EP2O14613 210 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 LYRM1O43325 122 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 INPP1P49441 399 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 RPE65Q16518 533 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 THOC7Q6I9Y2 204 aaKnown RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 HEPHL1Q6MZM0 1159 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 FAM111BQ6SJ93 734 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 VITQ6UXI7 678 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 TMEM91Q6ZNR0 172 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 CXXC5Q7LFL8 322 aaKnown RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 PEX5LQ8IYB4 626 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 NLGN4YQ8NFZ3 816 aaPredicted RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 OR7G2Q8NG99 324 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 NACC2Q96BF6 587 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 ARPC5LQ9BPX5 153 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 TMEM43Q9BTV4 400 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 NDEL1Q9GZM8 345 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 SLA2Q9H6Q3 261 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 ISG20L2Q9H9L3 353 aaKnown RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 ADAM30Q9UKF2 790 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 WDR45Q9Y484 360 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 STON1Q9Y6Q2 735 aa13.58□□□□□ -0.24
MSH5-201ENST00000375703 MUC22E2RYF6 1773 aaPredicted RBP13.58□□□□□ -0.24
MSH5-201ENST00000375703 KAT7O95251 611 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 ALAS2P22557 587 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 CFL1P23528 166 aaKnown RBP13.57□□□□□ -0.24
MSH5-201ENST00000375703 RNF144AP50876 292 aaPredicted RBP13.57□□□□□ -0.24
MSH5-201ENST00000375703 EOGTQ5NDL2 527 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 GANCQ8TET4 914 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 FGF13Q92913 245 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 FCRL4Q96PJ5 515 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 RNF32Q9H0A6 362 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 UBQLN3Q9H347 655 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 DENND4AQ7Z401 1863 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 TEAD1P28347 426 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 GCGRP47871 477 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 CTBP2P56545 445 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 VASNQ6EMK4 673 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 MFSD12Q6NUT3 480 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 CDC73Q6P1J9 531 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 PSRC1Q6PGN9 363 aaPredicted RBP13.57□□□□□ -0.24
MSH5-201ENST00000375703 SIRT6Q8N6T7 355 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 TOR1AIP2Q8NFQ8 470 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 OR4E2Q8NGC2 313 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 ARMC5Q96C12 935 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 ART5Q96L15 291 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 KRCC1Q9NPI7 259 aaPredicted RBP13.57□□□□□ -0.24
MSH5-201ENST00000375703 ALG5Q9Y673 324 aa13.57□□□□□ -0.24
MSH5-201ENST00000375703 TBC1D3KA0A087X1G2 549 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 TBC1D3FA6NER0 549 aaPredicted RBP13.56□□□□□ -0.24
MSH5-201ENST00000375703 SLC19A2O60779 497 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 PAICSP22234 425 aaKnown RBP13.56□□□□□ -0.24
MSH5-201ENST00000375703 GJA4P35212 333 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 CLDN2P57739 230 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 FZD5Q13467 585 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 Q5BKY6 102 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 TBC1D3GQ6DHY5 549 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 ZNF425Q6IV72 752 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 PLBD1Q6P4A8 553 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 DGLUCYQ7Z3D6 616 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 LRRC25Q8N386 305 aaPredicted RBP13.56□□□□□ -0.24
MSH5-201ENST00000375703 ACBD7Q8N6N7 88 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 YIPF7Q8N8F6 280 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 RSPH9Q9H1X1 276 aaPredicted RBP13.56□□□□□ -0.24
MSH5-201ENST00000375703 GTPBP1O00178 669 aaKnown RBP13.56□□□□□ -0.24
MSH5-201ENST00000375703 DVL2O14641 736 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 RNF13O43567 381 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 KCNJ13O60928 360 aa13.56□□□□□ -0.24
MSH5-201ENST00000375703 AGR2O95994 175 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms